| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6186 |
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| Symbol | |
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| ID | 7975076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 917883 |
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| End bp | 918866 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796756 |
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| Product | hypothetical protein |
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| Protein accession | YP_002948015 |
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| Protein GI | 239820830 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTCGA TCCAACGCCG GGCGCTGCTG TGCGCCACGG TGGCCTTCGC CGCCCTCCCG
CTGTCGACGC TTGCGCAGGA CTACCCCACG CGCCCCATCA CCATCGTCGT TCCTTTCTCC
GCCGGCGGCG GCGTCGATGC GATGGCGCGC CTGCTGGCGG AGAAGCTGCG CGTTTCACTG
AAGCAGTCGG TCGTGGTGGA CAACAAGCCC GGCGCGAGCG GCATGCTGGG CGCCGCCTTC
GTGGCAAAGG CCGCTCCCGA CGGCTACACG CTGCTGCTGG GTTCGGCGGG CGAGACCGCC
ATCAATCCGC TGGTCTACAA GACAAAGATG CAGTACTCGC CGGAGAAGGA CCTGGCGCCG
ATCACGGCCG TCACGCGGGT GCCGAACGTG CTGGTCGCGA ATCCATCGTT CCCGGCAAAG
GACCTGCCCG AGCTCGTGGC GTACGCGAAG AAGAACCCGG GCAAGGTGAC CTATGCCACG
AGCGGCGTCG GCAACCCGCA GCATCTGAAT GGCGAGCTGC TCCAGTCCCT GGCCGGCATC
CAGATGCAGC ACGTGCCTTA CAAGGGCGCC TCGAACCAGC TGGTCGACGT GGCGTCGGGC
AATGTCGACA TCACCTTCGT GAGCCTGGCC GGTGCAACGC CCTTCATCAA GGGCAACCGG
GTGAAGGCAC TGGCCGTGAC CTCGGCCAGG CGCGCCGGCT TTGCGCCGGA CATCCCGGCG
ATCGCGGAGT TCGCACCCAC GGCTTCCTAC GACCTGGACA ACTGGTTCGG TCTCTTTGCA
CCCGCGAAAA CGCCGCCTGC CGTGCAGGCG AAGCTCAACG AGGCAGTCAC CGCTGCCCTG
CGCGACCCCG AGCTGATCAA GCGATTGCGC GAGCAAGGCG GCGAGCCCAT GCCGCTCTCG
CAAACCCAGT TCCGCGACTT CATCAAGACC GAATCCGTCA AGTACGCGCA CATCGTCGAC
AGCGCCCGGA TCGTCGCGGA ATGA
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| Protein sequence | MHSIQRRALL CATVAFAALP LSTLAQDYPT RPITIVVPFS AGGGVDAMAR LLAEKLRVSL
KQSVVVDNKP GASGMLGAAF VAKAAPDGYT LLLGSAGETA INPLVYKTKM QYSPEKDLAP
ITAVTRVPNV LVANPSFPAK DLPELVAYAK KNPGKVTYAT SGVGNPQHLN GELLQSLAGI
QMQHVPYKGA SNQLVDVASG NVDITFVSLA GATPFIKGNR VKALAVTSAR RAGFAPDIPA
IAEFAPTASY DLDNWFGLFA PAKTPPAVQA KLNEAVTAAL RDPELIKRLR EQGGEPMPLS
QTQFRDFIKT ESVKYAHIVD SARIVAE
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