| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6158 |
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| Symbol | |
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| ID | 7975034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 881791 |
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| End bp | 883023 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796713 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002947987 |
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| Protein GI | 239820802 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.870392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGCCG AACCCTCCGC GAAAACCCGC GAGCTGCTCG AACGCCTCAA CAAGTTCTTC
GACCAGCACA TCTATCCGAA CGAAGCACGC TACCACCACG AGATGGACGC CTTCCGCCGC
CAGGGCAACG CCTGGCAGGT GTCGCCGCTG ATCGAAGAGC TGAAGCCCGT GGCGCGTGCG
GCAGGCCTTT GGAACATGTT CCTGCCGCAT CCGCACCGCG ATGTGCCGGC CATCTCCAAT
CTCGACTACG CGCCGCTGTG CGAAGTGATG GGCCGCGTGT CTTGGTCGGG CGAGGTGTTC
AACTGTTCGG CGCCCGACAC CGGCAACATG GAGACCATCG AGCGCTACGG CACCGAGGCG
CAGAAAGACG AATGGCTGGC GCCGCTGCTT GCGGGCGAGA TCCGCTCGGG CTTCCTGATG
ACCGAGCCGG CCGTTGCCTC GTCGGACGCC ACCAACATCC AGTGCACCAT CCGCCGCGAA
GGCGACGAGT ACGTGATCAA CGGCCGCAAG TGGTTCTCTT CGGGCGCAGG CAGCCCGCGC
TGCAAGATCT TCATCGTGAT GGGCAAGACC GACCCCGATG CGCCGCGCCA CGCGCAGCAG
TCGATGGTGC TGGTGCCGCG CGACACCCAG GGCATCACGG TGCTGCGCCA TCTTTCGGTG
TTCGGCTACG ACGATGCGCC GCACGGCCAC ATGGAAGTGC TGCTGGAGGA CGTGCGCGTT
CCCGCATCGT ACATCCTGCT GGGCGAAGGG CGCGGCTTCG AGATTGCGCA GGGGCGGCTC
GGCCCGGGGC GCATCCACCA CTGCATGCGC TCCATCGGCG CCGCCGAGCG TGCGCTCGAA
CTGATGTGCG ACCGCCTCCG CAGCCGCGTG GCCTTTGGTC GTCCGCTCGC GGAGCAGTCG
ATCTGGCACG AGCGCATTGC CGAGTCGCGC TGCCTGATCG ACCAGGCCCG GCTGCTCACG
CTCAATGCGG CCCACAAGAT GGACACCGTG GGCAACAAGG AAGCACGCGC CGAGATCGCG
ATGATCAAGG TGGTGGCGCC CAACATGTCG TGCAAGGTGG TCGACTGGGC GATCCAGGCC
CACGGCGCCG CCGGCGTGAG CCAGGACTTC TGGCTGGCCG AGGCCTACGC GCACCAGCGC
ACGGTGCGCA TTGTCGACGG GCCCGACGAA GTGCACCGCA ACGCGATTGC CAAGCTCGAA
CTGGCCAAAC GCGCCACGCC GGCGCGCGCC TGA
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| Protein sequence | MFAEPSAKTR ELLERLNKFF DQHIYPNEAR YHHEMDAFRR QGNAWQVSPL IEELKPVARA
AGLWNMFLPH PHRDVPAISN LDYAPLCEVM GRVSWSGEVF NCSAPDTGNM ETIERYGTEA
QKDEWLAPLL AGEIRSGFLM TEPAVASSDA TNIQCTIRRE GDEYVINGRK WFSSGAGSPR
CKIFIVMGKT DPDAPRHAQQ SMVLVPRDTQ GITVLRHLSV FGYDDAPHGH MEVLLEDVRV
PASYILLGEG RGFEIAQGRL GPGRIHHCMR SIGAAERALE LMCDRLRSRV AFGRPLAEQS
IWHERIAESR CLIDQARLLT LNAAHKMDTV GNKEARAEIA MIKVVAPNMS CKVVDWAIQA
HGAAGVSQDF WLAEAYAHQR TVRIVDGPDE VHRNAIAKLE LAKRATPARA
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