Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_6151 |
Symbol | |
ID | 7975027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 875316 |
End bp | 876287 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644796706 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002947980 |
Protein GI | 239820795 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCCCA GCAAAGCCAC GATCATCCAG CTCGACATTG CCTCGGACCT GCAGAAGTGG CGCGCCTTCC TCGCCATTGC CGAACTGGGA AGCCTGACGC GCGCCGCGCT GTTCCTGGAC AGCAGCCAGT CGCTGCTGAG CCGCCACCTC AACGCCCTGG AGCGTGAATG CAACGCGCGC CTGTTCAATC GCACGGGCCG CGGCGTGCAG CTGTCGGAGG TGGGCCAGCG GCTCTTTCCG CATGTGAAGG CGCTGCTCTC GGATGCCGAG CAGCTCCAGC TGGAGATTCG CGGCGAGGCG CGCGAGCCGG CCGGCCGCGT CACCATCGGC TCGCTGCCCT CGGTCACCAA TCCGATCGTC GGCAAGCTGT TCAATCGGCT GCAGGCGCGC CATCCCGGCA TCCAGCTCAA GATCCTCGAG GGATCGAGCG GACAGGTGGA AGAGTGGCTG GCGGACGCGC GCGTGGACAT CGCGATCCTC TATCGCTACG GCGCCGCGCT GCCGGAGCAG GAGCAGGCGC TTGCCACGGT GGACAGCTAC CTGGTCGGCG CCGCGGGCGA CCGCCTGACC GCGAAGCCGG AGCTGCCGTT CAGCGCACTC GACGGGCTCC CGTTCATCCT TCCGAGCGCA CCCAACGGAC TGCGCAGCGC GCTCGATGCG CTCGCCCGCC AGCAGCACAT TGCCCTGTCG CCCGTGCTCG AAGCCGACTC GCTGCCGCTG ATGCGTTCGG TCGTGGCGCA GGAGCGGCTC TACACGGTGC TGCCGCTGCA CGCGGTCTGG TCGGAGGTGG AGGAAGGCCG GCTGCAGGCT TCGAAGATCG TCTCGCCGGG CCTGCAGCGC ATCGTCTCGA TGATCCTGGC GCGCAGCAAG GGGCCGGGCA AGGCGGTCCA GGCCGTGGCT GCGCAGATCG TGCAGGCGGT GGAAGAAAGC ACGCGGCAGG GGCTCTGGCG CGCGGGCGCG CAGAGCGGCT GA
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Protein sequence | MQPSKATIIQ LDIASDLQKW RAFLAIAELG SLTRAALFLD SSQSLLSRHL NALERECNAR LFNRTGRGVQ LSEVGQRLFP HVKALLSDAE QLQLEIRGEA REPAGRVTIG SLPSVTNPIV GKLFNRLQAR HPGIQLKILE GSSGQVEEWL ADARVDIAIL YRYGAALPEQ EQALATVDSY LVGAAGDRLT AKPELPFSAL DGLPFILPSA PNGLRSALDA LARQQHIALS PVLEADSLPL MRSVVAQERL YTVLPLHAVW SEVEEGRLQA SKIVSPGLQR IVSMILARSK GPGKAVQAVA AQIVQAVEES TRQGLWRAGA QSG
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