Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_6148 |
Symbol | |
ID | 7975024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 871264 |
End bp | 872592 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644796703 |
Product | MmgE/PrpD family protein |
Protein accession | YP_002947977 |
Protein GI | 239820792 |
COG category | [R] General function prediction only |
COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.984063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGTCA CACAAACATT CGCGCGCTAC GCGGCCGACT TCCGGCGGCA GGATCTGCCG GCCGAGGTCC TCCATCACGC CAAGCGGGCC GTGATCGACT GGTACGCCTC GCTGTTCCCC GGCCTCGGCG CGGCGCCGGT GCGCCAGCTC GAGGCCGCCC TGAACGAGGA CCTGGATCGC GGACGCGCCT TTCTCGTCGG CGGTCGCCCG GCCACTGCGC GCGCCGCTGC GCTGATCAAC GGCACGGCGG CCCATGCAGC GGAGGTGGAC GACAGCTTTC GCGAAGCCAT GTACCACCCG GGCGCAGCCA CCATTGCCGC CGCGCTGGCC GCAAGCCATG ACGCCGGCGC AAGCGGGCTG CAGTTCCTGC GCGGCGTGGT GCTGGGCTAT GAAGTGTCGA CGCGCATCGG CGTCGTGATG GGCCGCGCGC ACTACCGGTT CTGGCACAGC ACGGGCACGG TGGGCAGCTT CGGCGCCGCG GCCGCTGCAG GCGTTCTCAT GGACCTGGAC GAAGCCGCCT TCGCGCATGC GCTGGCCACG GCCGCCACCT TCACGGCCGG CCTGCAGCAG GCCTTCCGCA TGGACTCCAT GTCCAAGCCG CTGCATGCGG GCCGCGCGGC CGAGGCCGGC GTGCTCGCAG CCCAGCTCGC GCGCAACGGT GTCACAGGCT CGCTCGACGT GCTCGAAGGA GAGGCCGGGC TGGGCCGGGC CATGAGCGAC GGGCCGGACT GGTCGCAGAT CGGCGCGACG CTGGGGCGGG ACTTCCACAT CGCCCGCCTG ACGTTCAAGA ACCACATCGG TTGCGGACAT GCCTTCGCGG CCATCGACGG CGCGCTGGCG TTGAAGCGCC GGCATGGCAT CGAGGCCGGC GAGATCGCGC ATGTGCACGT GGCAACCTAC CGCCCGGCGC TCGACATCGC CTGCTACACG CAGCCGGCCA CCGCCAACGA AGCGCGCTTC AGCCTCGGCT ACGTGGTGGC GACCGCGCTG GCGCATGGCA GCGTGCGGCT GGCGGCGTAC GAACCGGCGC GGCTGCAGGA CGCGGCCACG CGTTCATTGA TGGAGCGCAT CAGCGTTGCG GTGGACCCCG AGCTCGATGC CGCCTTTCCG GGCCGGCGCG CCGCGCGCGT GCTGATCACG ATGCACGACG GCCGCCGCTT CGAACACCTG CAGCCCAACC GCAAGGGCGA TCCGGAAGAG CCGCTGAGCG ATGCCGAGCT CGAGGACAAG TTCATGGAAC TGTCCTCGCC CGTGATCGGC AGCGCACCGG CGCGGGCGCT CTTGCACCGG CTCTGGACGC TGGAGCGCAG CGCGGCGGCG CCGAGCTGA
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Protein sequence | MHVTQTFARY AADFRRQDLP AEVLHHAKRA VIDWYASLFP GLGAAPVRQL EAALNEDLDR GRAFLVGGRP ATARAAALIN GTAAHAAEVD DSFREAMYHP GAATIAAALA ASHDAGASGL QFLRGVVLGY EVSTRIGVVM GRAHYRFWHS TGTVGSFGAA AAAGVLMDLD EAAFAHALAT AATFTAGLQQ AFRMDSMSKP LHAGRAAEAG VLAAQLARNG VTGSLDVLEG EAGLGRAMSD GPDWSQIGAT LGRDFHIARL TFKNHIGCGH AFAAIDGALA LKRRHGIEAG EIAHVHVATY RPALDIACYT QPATANEARF SLGYVVATAL AHGSVRLAAY EPARLQDAAT RSLMERISVA VDPELDAAFP GRRAARVLIT MHDGRRFEHL QPNRKGDPEE PLSDAELEDK FMELSSPVIG SAPARALLHR LWTLERSAAA PS
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