Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_6145 |
Symbol | |
ID | 7975021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 867323 |
End bp | 868321 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644796700 |
Product | hypothetical protein |
Protein accession | YP_002947974 |
Protein GI | 239820789 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.8095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAACC CCATGACGCT GGCGCGCGCC AGGCATGCCA TCCTTCTTAC GCTGGCCTGC GCGGTTGGCG GCCTCGTCGC GGTGCCGGCG CGCGCGGCCT TTCCCGACAA GCCGATCAAG CTCGTGGTGC CGTTCGCACC CGGCGGCGGC ACCGACCTCG TGGCCCGCAC CATGGCCATC GCGATGGGGC AGGAGCTGGG GCAGCCCGTG ATCATCGACA ACAAGCCCGG CGCGGGCACG ATCATCGGCA CGGACGCCGT GGCCAAGAGC GCCCCCGATG GCTACACGAT GGTGATGGCC ACGGTGGCGC ACGTCGTGAA CCCGAGCCTG CAGCCCAAGC TCCCGTACAA CCATGACAAG GCCTTTGCGC CGGTCATGCT GGTGGGCATT TCGCCGAACG TGCTGGTGGT TCGCGCGGAC AGCCCGCTCA AGTCGGTGAA GGACCTGGTC GATGCGGCCA GGGCCCAGCC GGGCAAGCTG TCCTTCGCGT CGCAGGGCGC GGGCACCTCG GCCCACCTGG CCGGCGAGCT CTTCAAGAAT CTCACCAAGA CCGACATCAC CCACATCCCC TACCGCGGTG CCGGCCCCGC CATCACCGAC CTGCTGGGCG GACAGGTCGA CGTGATGTTC GCGACCGCCG CTGCGGTGGG CAGCTTCGTC GAGAGCGGCA AGCTGCGCGC GCTGGCCGTG ACCACCGCCA CGCGCTCCAC GGCCCACGCG CTCGCGAAGG TGCCGACGAT CGCGGAGAGC GGCGTGCCGG GCTACGTTGC CGACAGCTGG TATGGCCTGT ACGCGCCCGC CGGCACCCCG GCCGACGTGA TCGCGCGCCT GAATGCCGCA GCGAAGAAAG CGGTGCAGAC GGAGGCCTTC CGCAAGCGGG TGGAGTCCGA GGGCCTCGTC ATCAACGGCG GCTCGCCGCG GGACTTCGAC AGGTACGCCA AGGGCGAGGA AGCGCGCTGG CGCAAGGTGG TCAAGGAAAA CAACATCACG GCCGAATGA
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Protein sequence | MLNPMTLARA RHAILLTLAC AVGGLVAVPA RAAFPDKPIK LVVPFAPGGG TDLVARTMAI AMGQELGQPV IIDNKPGAGT IIGTDAVAKS APDGYTMVMA TVAHVVNPSL QPKLPYNHDK AFAPVMLVGI SPNVLVVRAD SPLKSVKDLV DAARAQPGKL SFASQGAGTS AHLAGELFKN LTKTDITHIP YRGAGPAITD LLGGQVDVMF ATAAAVGSFV ESGKLRALAV TTATRSTAHA LAKVPTIAES GVPGYVADSW YGLYAPAGTP ADVIARLNAA AKKAVQTEAF RKRVESEGLV INGGSPRDFD RYAKGEEARW RKVVKENNIT AE
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