| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6114 |
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| Symbol | |
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| ID | 7975560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 834225 |
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| End bp | 835160 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796670 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947944 |
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| Protein GI | 239820759 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTCA AGCAGCTGGA GTACTTCGTT CGCGTGGCCG AGCTGGGGAG CTTCACGCGC
GCGTCGATCG TGATCGACGT GGCGCAGCCC GCGCTCAGCC GGCAGGTGCG CCAGCTCGAA
GTGGAGCTGC GGCAGAACCT GCTGACGCGC AACGGCCGCG GCGTCACGCT CACCGATGCG
GGCACGCTGC TGCTGGCGCA TGCCAGGGGC ATCCTGCACC AGATCGAGCG CGCCAAGGAA
GACCTCGGCC GCATGCGCGG CGCGCTGGCC GGCCGCGTCA CGGTGGGCCT GCCGCCGAGC
ATCGCCAAGC GCATTGCCGT GCCGCTGACC CGTGCCTTTC GCCAGCAGTT GCCCGATGCG
CGCCTTGCCA TCACCGAGGC GCTGTCGAGC GCCCTGCAGG AATCGGTGAC CGCGGGCCGC
ATCGACCTGG CGCTGCTCTA CAACCCCGCG CCCTCGGCCG ACATCGACAG CGTGGTCATC
CTCGAAGAAG ACCTGTACCT GGTCGGACCG GCCACGCAGC CCGGCGGGGA GATCGCGCTG
CGCGAGGTGG CCTCGCAGCC GCTCGTGATT CCGACCCAGC CCAATTCCAT CCGCATGCTG
GTCGAGGCGG AAATGGCCAA CATCGGATGC CGCCCGGCCA TCGCGATGGA GATCGACGGC
GTGGCCGCCA TTCTCGACCT GGTCATCGAT GGCGTTGGCT CCGCGGTGCT GTCCGCGAAC
GCGGTGCTCA CCGCGCCTCG GCCGGAGGCT TTCGGCATCC GGCGGATCGT GGATCCTCCG
CTGCGCAGCC GGCTGGCGCT GGCCGTCAGT TCGCAGCGTC CGGCCACGCT GACCCAGCAG
GCCGTTCTCG CGCTGGTGCG CGAGGTCGTG GATCAGACGA TGAATGCTTC GCCGGCACCG
GCGCTCACTG CTTCGGAATG CCGGCCAGGC GGATGA
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| Protein sequence | MDLKQLEYFV RVAELGSFTR ASIVIDVAQP ALSRQVRQLE VELRQNLLTR NGRGVTLTDA
GTLLLAHARG ILHQIERAKE DLGRMRGALA GRVTVGLPPS IAKRIAVPLT RAFRQQLPDA
RLAITEALSS ALQESVTAGR IDLALLYNPA PSADIDSVVI LEEDLYLVGP ATQPGGEIAL
REVASQPLVI PTQPNSIRML VEAEMANIGC RPAIAMEIDG VAAILDLVID GVGSAVLSAN
AVLTAPRPEA FGIRRIVDPP LRSRLALAVS SQRPATLTQQ AVLALVREVV DQTMNASPAP
ALTASECRPG G
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