| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6092 |
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| Symbol | |
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| ID | 7975538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 809648 |
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| End bp | 810805 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796648 |
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| Product | phosphonate metabolism protein PhnM |
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| Protein accession | YP_002947922 |
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| Protein GI | 239820737 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3454] Metal-dependent hydrolase involved in phosphonate metabolism |
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| TIGRFAM ID | [TIGR02318] phosphonate metabolism protein PhnM |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.86603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAG CACCCATCGT CTTTTCCAAT GCGCGCATGG TGCTGCCCGG CGAGGTGGTG
CACGGCGCGC TCTCGGTGGC CGGCGGGCGC ATCGAGGCGC TGGACGGCGG CGCCACCGCT
GCGGGCACCT TCGACCTCGA GGGCGACTAC CTGTTTCCGG GCCTGGTCGA GGTGCACACC
GACAACCTGG AGCGGCACCT GATGCCGCGC CCCAAGGTGC AGTGGGCCGA GATGCCCGCG
CTGCTCGCGC ACGACGCCGA GGTGGCTGCC GCCGGCATCA CCACGGTGTT CGATGCGCTG
GGCGTGGGCG AGGCTGACCC CGAGAGCCTG CGCGGCAGCA CCTGGGACAC GCTGCTCGAC
GTGCTCGACG GCTGCATCGA GAGCGACCTG CTGCGCGCCG ACCACCACCT GCACGTGCGC
TGCGAACTGC CGGCGCCCAA CACCATCGAG CTGTTCGAGC CGTTCCGCAA GCATCCGCGC
CTGTCGATGA TCTCGCTCAT GGACCACACG CCGGGCCAGC GCCAGTGGGA GAACATCGAG
GTTGCGCGCA TCTACTACAC CGGCAAGAAG GGCTGGAGCG ACGACAAGTT CGACCGCCGC
GTCTCCGAGG CCGTGCTGCT GCAGACACGC TATGCCGAGC CGCACCGCCG GCACTTCGTC
GAACATTGCC GCGCGCATGG CATTGCCCTG GCGAGCCACG ACGACACCAC CGTGGCGCAC
GTCGAGCAGG CGCATGCGGA GGGCGCCAGC ATGTCGGAAT TCCCGACCAC GCTGGCGGCC
GCGCGAGCGG CCCGCGAACG CGGCCTCGCC AACATCATGG GCGGGCCGAA CGTGGTGCGG
GGCGGCTCGC ACTCGGGCAA CGTGGCCGCG GCCGAGCTGG CGCGCCAGGG GCTGCTCGAC
ATCCTTTCTT CCGACTATGT GCCCGGCAGC CTCATGAGCG CAGTCATGCG GCTGGTGGAC
GAGGGCATCT GCACGCTGCC CGAAGCGGTG GCGATGGTGA GCCGCGCCCC CGCGCGCGCG
GCCGGCCTGG ACGACCGCGG CAGCCTGGCG CCGGGGCTGC GCGCCGACCT GGTGCAGGTG
CGCATCACCC AGATGGCCGA CGGTGCCAGG CACCCGGTGG TGCGCGGCGT GTGGCGCCAG
GGTCGGCGCG TGATCTGA
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| Protein sequence | MSAAPIVFSN ARMVLPGEVV HGALSVAGGR IEALDGGATA AGTFDLEGDY LFPGLVEVHT
DNLERHLMPR PKVQWAEMPA LLAHDAEVAA AGITTVFDAL GVGEADPESL RGSTWDTLLD
VLDGCIESDL LRADHHLHVR CELPAPNTIE LFEPFRKHPR LSMISLMDHT PGQRQWENIE
VARIYYTGKK GWSDDKFDRR VSEAVLLQTR YAEPHRRHFV EHCRAHGIAL ASHDDTTVAH
VEQAHAEGAS MSEFPTTLAA ARAARERGLA NIMGGPNVVR GGSHSGNVAA AELARQGLLD
ILSSDYVPGS LMSAVMRLVD EGICTLPEAV AMVSRAPARA AGLDDRGSLA PGLRADLVQV
RITQMADGAR HPVVRGVWRQ GRRVI
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