| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6074 |
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| Symbol | |
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| ID | 7975520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 794802 |
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| End bp | 796436 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796630 |
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| Product | filamentation induced by cAMP protein Fic |
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| Protein accession | YP_002947904 |
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| Protein GI | 239820719 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3177] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGCGA AAAATCTCAG GCCTCATGCC TCTGGCAACC CCGGAGATCC CATCGGAGCT
GCATGGCTCG TTCGCGCGTT CGGCCTTGAA CTCGTCCAGC CCATCTTTGT CCGCAGCGAG
ATCGGTCCCC GCAGACAGAC CGTACACCAT CCGGGGTACC GTCGGGAGGT CCACCAAGAG
CACATGCGAC CTGCTGCCAC GCTGCAGGCC CACCTGACTT TCATGCTCAA GCACGAGGGC
GTGCACCTCG AACTCCTGGC CCGCCTCTTT GAACGCCTGG ACCCGCTCGT CGTTGCCGAC
TGGGTGCGTG CAGAGCCGAA CGGTCAATAC GCCCGCCGGG CCGGTTTCTT CTACGAGTGG
CTCACTCGGC GAGAGCTGCC GATCGAGAAC GGCTTGGTCG GGGGCAACTA CGTCGAAGCC
CTGGATCCTG AAGAACAGGT GGTCGCGACC ACCAGCGTGC CGGTGGGCCG GTGGCGTGTG
CGGGACAACA TGCCGGGGAC CAGCGACTTC TGTCCCACGG TTCGCCTGAC GCCCGCGAAT
CACGAGGGGC TTCAGTTCGA CCTGGCCGGC GCGTTGGCTC GAGAGGAAGC TGAGTTTGGA
GCGGAGGTCC TGCGCAGAAG CGCAGTGTGG ATGACGCTGC GGGAAAGCCG CTCGAGCTTT
CAGATCGAAG GCGAGCAGGA CCAGATCACA CGTGTCCAAC GATTCGCCGC CGTGATGGAA
ACGCGCACCG GCGCGGGCGA CGCTCCGCTG ACACCCGATG CGCTGGCCAC GCTGCAGAAG
GACATCCTGG GCGAGGTGAC CACGCTCGCC TCGTTCGGCC TTCGGCGATC CCCCGTCTTC
GTGGGGCAAA TGGTGCACTT AGAGAACGTT GTTCACTACG TCGCGCCCGA CTGGCCTGAC
GTGGCGCCCA TGCTGGATGG TCTGAGGACC TTTGTCGAAC GAACGAATGG TGCGTCGCCG
ACTGCGCGAG CCGCGGTCGC CTCGTTCGGG TTCGTGTATA TCCATCCATT GGCGGACGGC
AATGGCCGCG TGCATCGGTT CCTCGTCAAC GATCTCCTCC GCCGAGACGG TGCAATCCAT
GCGCCATTCA TCCTCCCAAT CTCGGCCTTG ATCACGGAGC ACTCCGTGGA GCGCGCACGC
TATGACGCCG CGCTCGAGGC GTTTTCGCGC CCGTTGATGA GCAGGTATGC CGACCGGTAC
CGGTTCACGA GGGAGTCAGA GGTTCAACCT GACGGCGTGA TGTCGAACTT TCATTTCGAA
GCGTACGCAG ATGCGCGGCC GGCCTGGCGA TTCCTGGACC TGACAAGCCA TGTCGAATAC
ACAGCCGGGC TGCTTCAGCG CACGATCCAG CAGGAGATGC ATGCGCAAGC CTCCTTCTTT
CGAAGCCTCG GCCAGGCACG TGCCGCAGTG AAGGAACTCG TCGAGGGACC GGACGCCGAC
GTGGACGCGA TCATTCGCTC GGCCCGCGAG AACGATGGGG TGCGATCGGG AAAGCTGGCA
AAGCGCTTTC CGGCTCTGCA GAACGATGCG CTGTGGGAGA AGGTCGCTGC CGCGGTTGCG
CAATCCTTTG GCCCAGAGCC CCACGAAGCA GAGGGCACGG AGGACGATCC GGCCTCACGG
TCGCCGATTG GATGA
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| Protein sequence | MEAKNLRPHA SGNPGDPIGA AWLVRAFGLE LVQPIFVRSE IGPRRQTVHH PGYRREVHQE
HMRPAATLQA HLTFMLKHEG VHLELLARLF ERLDPLVVAD WVRAEPNGQY ARRAGFFYEW
LTRRELPIEN GLVGGNYVEA LDPEEQVVAT TSVPVGRWRV RDNMPGTSDF CPTVRLTPAN
HEGLQFDLAG ALAREEAEFG AEVLRRSAVW MTLRESRSSF QIEGEQDQIT RVQRFAAVME
TRTGAGDAPL TPDALATLQK DILGEVTTLA SFGLRRSPVF VGQMVHLENV VHYVAPDWPD
VAPMLDGLRT FVERTNGASP TARAAVASFG FVYIHPLADG NGRVHRFLVN DLLRRDGAIH
APFILPISAL ITEHSVERAR YDAALEAFSR PLMSRYADRY RFTRESEVQP DGVMSNFHFE
AYADARPAWR FLDLTSHVEY TAGLLQRTIQ QEMHAQASFF RSLGQARAAV KELVEGPDAD
VDAIIRSARE NDGVRSGKLA KRFPALQNDA LWEKVAAAVA QSFGPEPHEA EGTEDDPASR
SPIG
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