| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5993 |
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| Symbol | |
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| ID | 7975278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 716714 |
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| End bp | 717454 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796555 |
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| Product | transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_002947829 |
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| Protein GI | 239820644 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCGT CTTCTCCCTC GTCTTCTTCG CGCGCAGCCG TGGCGCGCAA CAGCCTCCTG
GAGGTGATGC CGCCGGAGGT GCTGATGGGC CTGATGCCGC TCCTTGAACT GGTGCCGCTC
AAGCTGGGCG AGGTGCTGTA CGAATCGGGC GTGGTCCAGC AGTACGTGTA CTTCCCGACC
GATTGCATCG TCTCGCTGCT GTACGTGCTG GAAAACGGGC AATCGGCCGA GATCGCCGTC
GTGGGATTCG AGGGGATGGT CGGCGTGGCG CTGCTGATGG GCGGGGGCAG CACGCCCAAC
CGCGCCGTGG TGCAAAGCGC AGGCCAGGCG TTCCGTCTGA GCGCCAGCCA CATCAAGCAG
CTGACGGACA ACGGCGGACC CCTGCTGCAT CTGCTGCTGC GCTACACCCA GTCGCTCATC
ACCCAGATGT CGCAGACGGC CGTCTGCAAC CGACACCACT CACTGGAACA GCAGCTGTGC
CGCTGGCTGT TGCTGAGCCT CGACAGGTTG CCCGGCAACG AGCTGGTGAT GACCCAGGAA
CTGATCGCCA ACATGCTCGG CGTGCGGCGC GAAGGAGTGA CGGAGGCGGC CGGCAAGCTG
CAGCGCCTGA ACCTGATCAA GTACTCGCGG GGTCACATCA CGGTGTTGGA CCGCCCGGGG
CTGGAGAAGC AGGTGTGCGA GTGCTACGAG GTCGTGAAGC GTGAAACGGA TCGCCTGCTC
CCTCGTCAGC TCGCAACCTG A
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| Protein sequence | MASSSPSSSS RAAVARNSLL EVMPPEVLMG LMPLLELVPL KLGEVLYESG VVQQYVYFPT
DCIVSLLYVL ENGQSAEIAV VGFEGMVGVA LLMGGGSTPN RAVVQSAGQA FRLSASHIKQ
LTDNGGPLLH LLLRYTQSLI TQMSQTAVCN RHHSLEQQLC RWLLLSLDRL PGNELVMTQE
LIANMLGVRR EGVTEAAGKL QRLNLIKYSR GHITVLDRPG LEKQVCECYE VVKRETDRLL
PRQLAT
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