| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5970 |
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| Symbol | |
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| ID | 7975009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 697058 |
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| End bp | 698662 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644796533 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_002947807 |
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| Protein GI | 239820622 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.633554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACGC CCGATCTGAG TTTCAAGCGC GCACGCGAGC GCGGCGAGTT GCACGGCAGC
TTCGACACTG TCGTTATTGG TTCCGGTGCT GGCGGTTTGA CGACCGCTGC CTTGCTGGCG
CTGGATGGTC AGCGGGTGCT GGTGCTGGAG CGCCATGCGG TTCTCGGCGG CTGTCTACAG
TCATTTACGC GCAAGGGCTT CGAGTGGGAT GTAGGCCTCC ACTACGTGGG CGAGGTGCAC
CGCAAGAGCA GTGGCCTCTA TCGCCTGTTC GACAAGGTCT CCCGCGGGCA GCTCGAATGG
GCACCCATGC CGGCGGTCTA CAACCGCATC ATCATCGGAG ACCGTAGCTT CGACCACGTG
GCTGGCGCCG AGGCCTACAA GGACCAACTC AAGGTCTATT TTCCGGGCGA GGCTGCAGCC
ATTGATCGCT ATGTGGAGCT CGTCGCTGAT GCCAATCGCG CTGCAAAGGC GTTCTTTGGC
GAGCGTGCTC TCCAGCATCG CTTGTCCGAC GCTTCGGTCA GCGCGCCACA GGCCGCCTTC
GCTCCATACT CTCAGCGTAC GGTGCTGGAG GTATTGAACG AGTTGACCGA CAACGCCGAT
CTCAAGGCGG TTTGGTGCGG CAACTACGGG GACTATTGCA ACTCACCTGC CGAAGCGGCC
TTCGCCGTCC ACGCAATGGT GTTTCATCAC TATATCGACG GTGCCAGCTA TCCGGTGGGT
GGTGCACCAC GAATCGCAGA AGCCATGGCA GACACGGTTC GCGCGGCAGG TGGCGCCTGC
CTGGTGGCCG CCGAAGTTGT CGGCCTGAGG ATGCACAACG ACCGGGTGGT GGGGGTCGTG
ACCGCCGATG GCAGCGACAT TGAAGCGCGC CGCGTTGTCA GTTCCATTGG CATTTCGCAG
ACTCTGCCAT TGTTGGCCCA TGCCGACCCT GAACTGATCC GGCCGCTGAC GCAGGCCACC
CAGTCTCTGG GGACGACACA GTGTTTTGCG GTACTCAACG TTGGGGTGGA TGCGGGCAAT
GGCGAGCTGG GCATCCATCC GGGAAACCTT TGGGTTCACC CCACAAATGA TCTCACGCGG
AATCTCTCTC GCTACAAAGC CGACCCCGCA GGCGAGCCCA TGCCGCTCTA CTTCATGACG
CACCCGTCAT TGCGTGATCC GAGTTGGGCG GCTCGCTATC CTGGACGCAG CACCATGGAC
GTTTGCGGCC TCACTGATTG GTCCGTCTTC GAGCGCTTTG CTGGCACTGA ATGGATGCGC
CGTGGTGCCG AGTACGACGA CATGAAGGCT CAATTGACTG AGCATTTGCT CGCTGAGGCC
TTTCGCCGCT TCCCGCAGCT CCGAGGGCGA GTTGCCCATG CCGAACTGGC CACACCGCTG
AGCTTCAATC ACTTCTTGAA TCGCACTCGA GGCAATTTCA TGGGCTTCGA ACAGACGCCG
CGGCGCTTTG CCCAGCGCTG GATGGGCGCT CACGCGCCGG TCAAGGGCCT GTACTTCAGT
GGCCAAGACG TGGCGGCCGC GGGCGTCAGT GGTGCAATGG TCGGCGGTCT GGTGGCCGCC
AGCGCCGTGC TCGGGCGCGA CCTCTTCCGT GAACTGAGAT CCTAG
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| Protein sequence | MNTPDLSFKR ARERGELHGS FDTVVIGSGA GGLTTAALLA LDGQRVLVLE RHAVLGGCLQ
SFTRKGFEWD VGLHYVGEVH RKSSGLYRLF DKVSRGQLEW APMPAVYNRI IIGDRSFDHV
AGAEAYKDQL KVYFPGEAAA IDRYVELVAD ANRAAKAFFG ERALQHRLSD ASVSAPQAAF
APYSQRTVLE VLNELTDNAD LKAVWCGNYG DYCNSPAEAA FAVHAMVFHH YIDGASYPVG
GAPRIAEAMA DTVRAAGGAC LVAAEVVGLR MHNDRVVGVV TADGSDIEAR RVVSSIGISQ
TLPLLAHADP ELIRPLTQAT QSLGTTQCFA VLNVGVDAGN GELGIHPGNL WVHPTNDLTR
NLSRYKADPA GEPMPLYFMT HPSLRDPSWA ARYPGRSTMD VCGLTDWSVF ERFAGTEWMR
RGAEYDDMKA QLTEHLLAEA FRRFPQLRGR VAHAELATPL SFNHFLNRTR GNFMGFEQTP
RRFAQRWMGA HAPVKGLYFS GQDVAAAGVS GAMVGGLVAA SAVLGRDLFR ELRS
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