Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5966 |
Symbol | |
ID | 7975005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 692125 |
End bp | 694209 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644796529 |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_002947803 |
Protein GI | 239820618 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.858122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACCC CCTCCACCCC CAATCTGCGC ATCGCGGTCG ACATCGGCGG CACCTTCACC GACATGGCCG CCTTCGACGA GGCCACCGGC AAGCTGCTGT TCGGCAAGGC GCTCTCGACC CACGGCCAGC TCGTCAATGG CATCCAGGCC ACGCTGGACA GCGCCGACAT CGATGTGCGT AACGGGCAGC TGTTCCTGCA CGGCTCCACC ATTGCCATCA ACACGCTGCT GGAGCGCACC GGCGCCAACA CGGCCCTGCT GATCACGGAA GGCTTTCGCG ACATCTACGA GATCGGCCGC GTCAACCGTC CCGATGCCTA CAACCTGTTC TTCAACAAGC ACCAGCCGCT GGTCAAGCGC TCGCTGCGCT TCGAGGTGAC CGAGCGCCTG CGCGCCGACG GCAGCTTGCA CAAGCCACTG GACGAGGGCG CGGTGCGCGA ACTGGCGCGC GAGCTGAAGA GCCAGAACAT CGAAGCGGTG GCGGTGCTGC TGCTGCACTC GTATCGCAAT CCGGCGCACG AGCAGCGCGT CAAGCAGATC CTGCAGGAAG AACTGCCGGG CGCCTTCGTC TCCGCTTCGC ACGAGCTTTC TCAGGAATAC CGCGAGTTCG AGCGCGTCTC CACGGTCGTG GCCAACGCCT ACGTCGGGCC CCGTGTCTCC GAATATCTCG GCCAGCTCGA GACGCACCTT TCCGACAAGG GCTTCGGCGG CGACTTCTAC GTCGTGCAGT CGACCGGTGG CCTGTTTCCG ATCGAGCATG CACGCGTCGG CTGCGTCCGG ATGCTGGAGT CCGGCCCCGC AGCCGGCGTG ATCGGCGCGC AGGCGATCTG TGCACAACTC GGCATGGGCG ATGCGATTGC CTTCGACATG GGCGGCACGA CGGCCAAGGC GGGCGTGATC AGCCAGGGGC GGCCGCTCAC GACGGGCTCG GCGCTGATCG GCGGCTACGA GCGCGCGCTG CCGATCCAGA TTCCGATGAT GGACATCCAC GAGGTCGGCA CCGGCGGCGG TTCGATCGCC CGCGTGGAGA CCGGCAACGC GCTGCGTGTG GGGCCGCAGA GCGCGGGCTC CATTCCCGGG CCGGTGGCCT ATGGACGCGG CGGCAAGGAG CCGACCGTGA CCGACGCCAA CCTGGTGCTG GGCCGGCTCG ACGCCGACAA CTTCCTGGGC GGCGAACTCA AGCTCGACCT GGAAGGCTGC AAGCGCCAGA TGGCCGAGCG CGTGGCCGGC CCGCTGGGCC TGGACCCGAC CGAGGCGGCC GACGGCATCC TGCGCATCGC GGTGACGCAG ATGTCGCACG CCGTGAAGGC CGTGACCACC GAGCGCGGCC TGGACGCCGG CAGCTTCACC ATGGTGGTGT ACGGCGGCGC CGGCCCGCTG CATGCCTCGG CGATTGCACG CGAGATCGGC ATCCGCAAGG TGCTGATTCC GTACGCGCCG GGCTACTTCT CGGCCTACGG GATGCTGTTC TCCGACTTGC GCTACGACTA CGTGCGCTCG GTGTTCCGCA AGCTCAACGA CGTCTCCTTC GAGGAGATCG AATCCGCCTA CAAGACGATG GAAGACGAGG GCCGCGCCGC GCTGGCGCAG TCCGGCGTGA AGGCGGACGG CGTCGTGATC GAGCGCGCGG CCGATATGCG CTACGTGGGC CAGGAGCACG CGGTGACGGT CGACCTTCCG CTGGCGTTCT TCGAAGGCAA GGACCGTTCG GCGATCAAGC AGCAGTTCGA TGAACTGCAC AAGGTGCGCT ATGGCACGTC GGCGCCGAAG GAGCCGGCGG ACCTGGTGAG CCTGCGCGTC ACTGTGCTCG GCATCATGAA GAAGCCGCCC AAGCACAGCG TCGACGAGGG GTCGTCCAAG CCCGAGAAGG CCGCAATGCG TGCGGTCAAA CCGGTGTACT TCCGCTCTGG CGGCTGGGCC GACACGCCCA TCTACAAGCG CGACCGGCTG CGCGCGGGCA ACGTCATCAG CGGCCCCGCG CTGATCGAGG AGCACGCCTC CACCACCGTG ATGCAGCCAG GCGACGAGAT GCGCGTGGAC GAACTCGGCA ACCTTCAAAT TTCCATCGGG AGCGATCGAT CATGA
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Protein sequence | MATPSTPNLR IAVDIGGTFT DMAAFDEATG KLLFGKALST HGQLVNGIQA TLDSADIDVR NGQLFLHGST IAINTLLERT GANTALLITE GFRDIYEIGR VNRPDAYNLF FNKHQPLVKR SLRFEVTERL RADGSLHKPL DEGAVRELAR ELKSQNIEAV AVLLLHSYRN PAHEQRVKQI LQEELPGAFV SASHELSQEY REFERVSTVV ANAYVGPRVS EYLGQLETHL SDKGFGGDFY VVQSTGGLFP IEHARVGCVR MLESGPAAGV IGAQAICAQL GMGDAIAFDM GGTTAKAGVI SQGRPLTTGS ALIGGYERAL PIQIPMMDIH EVGTGGGSIA RVETGNALRV GPQSAGSIPG PVAYGRGGKE PTVTDANLVL GRLDADNFLG GELKLDLEGC KRQMAERVAG PLGLDPTEAA DGILRIAVTQ MSHAVKAVTT ERGLDAGSFT MVVYGGAGPL HASAIAREIG IRKVLIPYAP GYFSAYGMLF SDLRYDYVRS VFRKLNDVSF EEIESAYKTM EDEGRAALAQ SGVKADGVVI ERAADMRYVG QEHAVTVDLP LAFFEGKDRS AIKQQFDELH KVRYGTSAPK EPADLVSLRV TVLGIMKKPP KHSVDEGSSK PEKAAMRAVK PVYFRSGGWA DTPIYKRDRL RAGNVISGPA LIEEHASTTV MQPGDEMRVD ELGNLQISIG SDRS
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