| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5930 |
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| Symbol | |
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| ID | 7974969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 633691 |
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| End bp | 634662 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644796495 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947769 |
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| Protein GI | 239820584 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGA GAATCTTCCT GCGAGCGATC GCAACCGCTG CGCTGTGTGC TGGAAGCATC
CCGGCCATCG CGGACAACTA TCCCTCGCGG CCCGTGAAAA TCATCGTGCC GTACGTGGCG
GGCGGCACGG TCGATCTGGT GGCCCGGGTG CTGGCCCAGA AGCTGGGGGA CCAGATGGGC
CAGCCGTTCA TCGTGGACAA CCGCCCTGGT GCCAGCGGAT CCATCGGAAG CGACATCGCC
TCCAAGGCAC CGCCCGACGG CTACACGCTC CTGCTTCAAT CGCCGACGCT TGTCGCAAGC
CCTTTTCTCA TGAAGAAGAC GCCCTACAAC GTGAAGACCG ATTTCACGGC GATTTCTCTG
CTGGGGTCGG TGCCGATGGT GGTCGTGGCA AACCCGGGTG TGCCGGGCAA GAATCTGCAA
GAGTTCCTCG CGGCGGCCCG CCGCGAGCCG TCGAAGTATG CGTTTGGAAC TTCGGCCATC
GGATCTCCGA TGCACCTGGC GCAGGAGGCA ATCAAGCGAG ACGGCAAGCT CGACGTGCCC
ATCGTCATCT ACAAGGGCAC GGGCAGTGCA CTCAACGATG TCTTGGGAGG ACAGATCAGC
GTGATCATCG ACGCGATCCC GTCTTCTGCT CCCAACATCG CGGCTGGCAA GCTCAAGCCC
CTCGCCGTCA CCACGCGCGA ACGCCTGCCC TCCATGCCCA ATGTGCCGAC GGTCGCGGAA
TCCGGCTTTG CCGGCTTCGA AATGGTCACC TGGTATGGGC TGTGGGCGCC GCCCAAGCTG
CCTGCAGCGA TCCTTGAGCG GCTTTCGGCG GAGGTTGCCA CGGCCATGCG CTCTGCGTTC
GTGGCCGAAC GCCTCGGGCC GCAGGGCTTT GTGCCCTCCC CGGGTACTCC GGCCGAATTT
TCCGCTTACA TCGACAAGGA AGCGGCCACC TACGAGCGCA TCGTGAAGGA TGCCAAGATT
CAGATCGACT GA
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| Protein sequence | MNKRIFLRAI ATAALCAGSI PAIADNYPSR PVKIIVPYVA GGTVDLVARV LAQKLGDQMG
QPFIVDNRPG ASGSIGSDIA SKAPPDGYTL LLQSPTLVAS PFLMKKTPYN VKTDFTAISL
LGSVPMVVVA NPGVPGKNLQ EFLAAARREP SKYAFGTSAI GSPMHLAQEA IKRDGKLDVP
IVIYKGTGSA LNDVLGGQIS VIIDAIPSSA PNIAAGKLKP LAVTTRERLP SMPNVPTVAE
SGFAGFEMVT WYGLWAPPKL PAAILERLSA EVATAMRSAF VAERLGPQGF VPSPGTPAEF
SAYIDKEAAT YERIVKDAKI QID
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