| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5899 |
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| Symbol | |
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| ID | 7975950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 610250 |
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| End bp | 611134 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796473 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_002947747 |
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| Protein GI | 239820562 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.648504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAACTT CAGAAAAAGT TGCGTCGCAC GGCCGCCGAT CATGGCTTGC GGCGCTGGGC
GCCCTCTCGC TGCTGTCTGC CTGCGCGCAT CGTGGGGGCG GGATGATGGC ACGCCGGCGC
GAGCTGCTGC GCGAGGGGGA CGTTCAGTTG GATGTGATCG TCGAAGGCAC GGGACCGACA
TTGGTGTTAC TGCCGTCGTC GCAGCGCGAT TCTGAGGATT ACGACGAACT CGCGCATCTG
CTTGCGACGA AGGGTTTCAA GGTGCTTCGC CCGCAGCCGC GTGGAATGGG CGCAAGCCGC
GGCCAGATGC AAGAGCTGAG CCTGGATGCG CTGGCCGGCG ATGTAGCGCT CGCGGTGCGG
CGCCTCGGAG ACGGCCGCGC CGTGATCGTG GGGCACGCTT ACGGCCACTT CGTGGCGCGC
GTGGCCGACC TTAGGTACCC AGAGCTCGTT CGCGGCGTGG TAGTGCTCGC AGCCGCGGCC
CGTACATTTC CGCCAGGGGT ACAACCGTCC CTGCTCGTCG CCGCCAATCC CACGCAACCC
CGCGACGCGC GCCTGGCCGC ACTGCGTCAC GCCTTCTTCG CCCCAGGGAA TGATCCCACC
CCATGGCTGG AGGGCTGGTA TCCAGAACTG TCTGCCGCGT ACCGCGACGC GCAGACCCGC
CCGCCCAAGG ACCAATGGTG GCCCGTCAGC CATTCGACCA TCTTGGACCT GCAGGGCGCC
GACGATCCCT GGCGGCCGCC GGCGACCCGG AACGAGTTGA AGGCGGTGTT GGGCGACAAG
GTGACCGTAC AGGTCATCCC GCGCGCCAGC CACGCGATGG TACCGGAGCA GCCGCATGCG
GTGGCGGAAG CGGTCGCGAG GTGGGCCGGC GGACTGCCGC CGTGA
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| Protein sequence | MRTSEKVASH GRRSWLAALG ALSLLSACAH RGGGMMARRR ELLREGDVQL DVIVEGTGPT
LVLLPSSQRD SEDYDELAHL LATKGFKVLR PQPRGMGASR GQMQELSLDA LAGDVALAVR
RLGDGRAVIV GHAYGHFVAR VADLRYPELV RGVVVLAAAA RTFPPGVQPS LLVAANPTQP
RDARLAALRH AFFAPGNDPT PWLEGWYPEL SAAYRDAQTR PPKDQWWPVS HSTILDLQGA
DDPWRPPATR NELKAVLGDK VTVQVIPRAS HAMVPEQPHA VAEAVARWAG GLPP
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