| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5796 |
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| Symbol | |
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| ID | 7974917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 498497 |
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| End bp | 499450 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796377 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002947651 |
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| Protein GI | 239820466 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGTCG CGATCCTTGC TTTTCCCCGT GTCCAGCTGC TCGACGTCGC CGGCCCCGCC
GACGTGTTCG CCGAGGCGGC CCGCCAGCTC GGGCTGCCGC GCGCCTACCA GGTGCAGGTG
ATCGGCACCG AGACAGGGTT GCTCAAGAGC AGCAGCGGGG TGCGGTTGGC GGTCGATGCC
ACGGTGGGCA CGCATCGCGG GCCGATCGAC ACCTTGCTCG TGGCCGGCAG CCCCGGCATG
GATGACGTGG TCGGCGATGC GGTGCTGCAC AACTGGCTCA GGCGCCAATC GCGCACGGTG
CGCCGCTATG GCTCCGTATG CAGCGGCGCC TTCGTGCTCG CGTCCGCCGG GCTGCTGGAC
GGCAAGCGCG TGGCGACTCA CTGGAACTCC ACCGCGCGCC TGGCCACGGC CTACCCGCTG
GCATGTGTCG AACCGGACGC GATCTATGTG AAGGACGGCA AGCTCTTCAC CTCGGCCGGG
GTGACCGCGG GCATGGACCT GGCGCTCGCC ATGGTGGAGG AGGACCACGG CCGCGAACTC
GCGCTGCGCG TCGCGCGCGA GCTGGTGATG TTCCTCAAGC GCCCGGGCGG CCAGAGCCAG
TTCAGCGCCC ACCTGGCGGC CCAGACTTCC GAGCGATCGA GCATGCGGCA GGTCCAGGAC
CATGTGCTTT CGCACCTGAA GGACGACCTC TCCGTGCCCG CGCTGGCCGC GCGGGCCGGC
ATGAGCGAGC GCAGCTTTGC GCGGATTTTT CGAAGCGAGA CCGGCACCAC GCCGGCCGAG
TTCGTCGAGA ACGCCCGCAT CGATGCCGCC CGCCGCCTGG CCGAGGAGTC GCAGCTGCCG
GCCAAGCGCC TGGCGGGCGA AGTGGGCTAT GCCAACGTGG ACGGCTTCAG GCGCGCCTTC
GGCCGGCGCC TTGGCGTGAG CCTCGTGGAG TATCGGAGGC GGTTCGCGAA GTGA
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| Protein sequence | MRVAILAFPR VQLLDVAGPA DVFAEAARQL GLPRAYQVQV IGTETGLLKS SSGVRLAVDA
TVGTHRGPID TLLVAGSPGM DDVVGDAVLH NWLRRQSRTV RRYGSVCSGA FVLASAGLLD
GKRVATHWNS TARLATAYPL ACVEPDAIYV KDGKLFTSAG VTAGMDLALA MVEEDHGREL
ALRVARELVM FLKRPGGQSQ FSAHLAAQTS ERSSMRQVQD HVLSHLKDDL SVPALAARAG
MSERSFARIF RSETGTTPAE FVENARIDAA RRLAEESQLP AKRLAGEVGY ANVDGFRRAF
GRRLGVSLVE YRRRFAK
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