| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5779 |
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| Symbol | |
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| ID | 7974900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 483608 |
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| End bp | 484420 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796360 |
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| Product | Methyltransferase type 11 |
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| Protein accession | YP_002947634 |
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| Protein GI | 239820449 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.796207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA CGTCCTCGAC CTTCGTCGCC ACCGACGGCG ATGGCTATGA ACGGCTGATG
GGCCGCTGGA GCCGCCTTCT TGCGCTGCCT TTCCTCGACT TTGTCGCCAC CGCGGACGGC
GACCGCATCC TCGACGTCGG ATGCGGCACC GGCCACCTGA CTTTCGCCGT GGCCCGCCGC
ACCGGCGCCG GCGAAATGCG GGGCGTGGAC ATCGCGCTGC CCTACATCGA GCATGCCAGG
CGCCACAACG AGGATGCGCG CATCGTCTTC GAGGTGGGCG ATGCCTGTTC GCTGCCGTAT
CCGGCGCAAA GCTTCGACCG CGTGCTCTCG CTGCTGGTGC TGCACTTCGT GCCGGAGCCG
GGCAAGGCCA TTGCCGAGAT GCGCCGCGTC GCCCGGCCCG GCGCGGTGGT CGGTGCGGCG
GTGTGGGACG CGCGCGGCGG CTGGGTCTCC AACCGCATGT TCTTCGACAC CGCCGCCATG
CTCGACCCCG AGGCCGGCGC CCGCCGCGCC CGCAACTACA CGCGGCCCCT CACGCGGCCC
GGTGAACTGG CCCGGGCCTG GCGCGACGCG GGGTTCAAGG GCGTGGAAGA AACGACGCTC
GCCATCCGCA TGGAGTTTGC CTCGTTCGCC GACTACTGGG CGCCCTTCGA GGGCAAGGAC
GGGCCCGGCG CGGAATACGT CGCGACGCTC GATGCGGATG CGCGCTCCAG GCTGCGCGAG
GCGGTCGAGG CGGCCTACCT CGACGGCGAA GCCGATGGCG CGCGCTCCTA TGCCGCGCTC
GCGTGGGCCG TCAAGGGCAC GGCGCCGGCG TAG
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| Protein sequence | MSTTSSTFVA TDGDGYERLM GRWSRLLALP FLDFVATADG DRILDVGCGT GHLTFAVARR
TGAGEMRGVD IALPYIEHAR RHNEDARIVF EVGDACSLPY PAQSFDRVLS LLVLHFVPEP
GKAIAEMRRV ARPGAVVGAA VWDARGGWVS NRMFFDTAAM LDPEAGARRA RNYTRPLTRP
GELARAWRDA GFKGVEETTL AIRMEFASFA DYWAPFEGKD GPGAEYVATL DADARSRLRE
AVEAAYLDGE ADGARSYAAL AWAVKGTAPA
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