Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5751 |
Symbol | |
ID | 7974872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 457491 |
End bp | 458474 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644796332 |
Product | hypothetical protein |
Protein accession | YP_002947606 |
Protein GI | 239820421 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0796477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGACAC CCTTGTTCAT TCGACGCCTC GCCATTCCCC TGGCCCTTGC CCTCTGCGCC ATCCAAGCGC CGGGCTTCGC GCAGACTTTT CCTTCGCGCC CCGTCACGCT GGTGGTGCCG TTCCCGCCGG GCGGCGGGAC GGACACCGGC GGCCGCGTCA TCGCCGAGCA GCTGGGCCGG CGCTGGGGCC AGCCTGTGAT CGTGGAGAAC AAGGGTGGCG CCGCCGGGCA GATCGGCGCC GACTTCGTCG CCAAGTCCAG GCCGGACGGC TACACGCTGC TGCTGGGCAA CATCGGGACG CAGGCGATCA ATCCGCTGCT GTATCCCAAG CTGCCCTACG ACGCCGACAA GGCCTTTGCG CCCGTCTCGT TGGTGGCCGA ACTGCCGCTG GCGATGATGG TGAATCCAGC GGTTCCGGCG AAGACGGCGG CCGAATTCGT GGCGCTGGCC AAGGCCAGGC CGGGCCAGAT GAGCTACAGC AGCTCGGGCG CCGGCGGCGC ACCGCACCTG GCGGCCGAGA TGTTCAAGGA CCAGACCGGT GCCTTCATCC TGCATGTGCC CTACCGCGGC GGCGGGCCGG CCATCGCCGA CCTGCTCGCG GGCCATGTGC AGCTGTCGTT CATGACCGTG CTCGAGGCCT CCGGCCACAT CAAGGCGGGC AAGCTGCGTG CGCTGGCCGT GACCGGCGAC AAGCGCGTGC CGGCGTTTCC CGAAGTGCCC ACGCTCGCCG AAAGCGTGGC GCCCGGCTTC AACGCGATCT CCTGGATCGG CCTGCTCGCA CCGGCGGGCA CGCCGCCCGA GGTGGTGGAG AAGATCGCCG CCGACCTGCG CGCCGTGCTG GCCGACGAAT CGGTCAAGGC GCGCTTCGTG GGGCTGGGCG GCGTGCCGCG CGCCACATCG CCGCAGGAGT TCGCGCGGCT GATCGACGGC GACAAGCGCC GCTACGCCCA GATCATCCGC AGCCGCAAGA TCACGATCGA GTGA
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Protein sequence | METPLFIRRL AIPLALALCA IQAPGFAQTF PSRPVTLVVP FPPGGGTDTG GRVIAEQLGR RWGQPVIVEN KGGAAGQIGA DFVAKSRPDG YTLLLGNIGT QAINPLLYPK LPYDADKAFA PVSLVAELPL AMMVNPAVPA KTAAEFVALA KARPGQMSYS SSGAGGAPHL AAEMFKDQTG AFILHVPYRG GGPAIADLLA GHVQLSFMTV LEASGHIKAG KLRALAVTGD KRVPAFPEVP TLAESVAPGF NAISWIGLLA PAGTPPEVVE KIAADLRAVL ADESVKARFV GLGGVPRATS PQEFARLIDG DKRRYAQIIR SRKITIE
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