Gene Vapar_5751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5751 
Symbol 
ID7974872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp457491 
End bp458474 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content70% 
IMG OID644796332 
Producthypothetical protein 
Protein accessionYP_002947606 
Protein GI239820421 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0796477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGACAC CCTTGTTCAT TCGACGCCTC GCCATTCCCC TGGCCCTTGC CCTCTGCGCC 
ATCCAAGCGC CGGGCTTCGC GCAGACTTTT CCTTCGCGCC CCGTCACGCT GGTGGTGCCG
TTCCCGCCGG GCGGCGGGAC GGACACCGGC GGCCGCGTCA TCGCCGAGCA GCTGGGCCGG
CGCTGGGGCC AGCCTGTGAT CGTGGAGAAC AAGGGTGGCG CCGCCGGGCA GATCGGCGCC
GACTTCGTCG CCAAGTCCAG GCCGGACGGC TACACGCTGC TGCTGGGCAA CATCGGGACG
CAGGCGATCA ATCCGCTGCT GTATCCCAAG CTGCCCTACG ACGCCGACAA GGCCTTTGCG
CCCGTCTCGT TGGTGGCCGA ACTGCCGCTG GCGATGATGG TGAATCCAGC GGTTCCGGCG
AAGACGGCGG CCGAATTCGT GGCGCTGGCC AAGGCCAGGC CGGGCCAGAT GAGCTACAGC
AGCTCGGGCG CCGGCGGCGC ACCGCACCTG GCGGCCGAGA TGTTCAAGGA CCAGACCGGT
GCCTTCATCC TGCATGTGCC CTACCGCGGC GGCGGGCCGG CCATCGCCGA CCTGCTCGCG
GGCCATGTGC AGCTGTCGTT CATGACCGTG CTCGAGGCCT CCGGCCACAT CAAGGCGGGC
AAGCTGCGTG CGCTGGCCGT GACCGGCGAC AAGCGCGTGC CGGCGTTTCC CGAAGTGCCC
ACGCTCGCCG AAAGCGTGGC GCCCGGCTTC AACGCGATCT CCTGGATCGG CCTGCTCGCA
CCGGCGGGCA CGCCGCCCGA GGTGGTGGAG AAGATCGCCG CCGACCTGCG CGCCGTGCTG
GCCGACGAAT CGGTCAAGGC GCGCTTCGTG GGGCTGGGCG GCGTGCCGCG CGCCACATCG
CCGCAGGAGT TCGCGCGGCT GATCGACGGC GACAAGCGCC GCTACGCCCA GATCATCCGC
AGCCGCAAGA TCACGATCGA GTGA
 
Protein sequence
METPLFIRRL AIPLALALCA IQAPGFAQTF PSRPVTLVVP FPPGGGTDTG GRVIAEQLGR 
RWGQPVIVEN KGGAAGQIGA DFVAKSRPDG YTLLLGNIGT QAINPLLYPK LPYDADKAFA
PVSLVAELPL AMMVNPAVPA KTAAEFVALA KARPGQMSYS SSGAGGAPHL AAEMFKDQTG
AFILHVPYRG GGPAIADLLA GHVQLSFMTV LEASGHIKAG KLRALAVTGD KRVPAFPEVP
TLAESVAPGF NAISWIGLLA PAGTPPEVVE KIAADLRAVL ADESVKARFV GLGGVPRATS
PQEFARLIDG DKRRYAQIIR SRKITIE