Gene Vapar_5737 details

Gene Information

• Locus tag: Vapar_5737
• ID: 7974858
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 444977
• End bp: 445471
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 644796318
• Product: transcriptional regulator, AraC family
• Protein accession: YP_002947592
• Protein GI: 239820407
• COG category: [K] Transcription
• COG ID: [COG2207] AraC-type DNA-binding domain-containing proteins

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCATCG ACCCGATCAT CCAGGACCCC GCACTGCTGC GGCGGCTGCT GCGCGCCAAG 
GACCGGATGG ACGCCGCGTC GCACGAGGAG TGGCCGGTCG AACGGCTGGC GCAGGTGAGC 
GGCGTGTCGG AGGCCCACTT CGCGCGATCG TTCAAGCAGG CCTTCGGCAC GCCGCCGCAC 
CGGTACCTGC TCACGCGCCG CATCGAGCGC GCGATGGCGC TGCTGCGCGA GAGCGACCGG 
CCGATCACCG ACATCGCCTT CGAGACGGGC TGGGCCAGCC TGGGCACCTT CGGGCGCACC 
TTCCGCGACA TCACCGGCAG CAGCCCGAGC GCGATCCGCG CGCGCGCCAA GGCCACGCCG 
CAAGAGCTCG GCCGGGTGCC CGTGTGCATC GTCAATGCCG CGCACCGGCC CCATCTCACG 
ACCGCAGTTT CGGAGAAGCG GCGCCTCGCG GCGGACGGTA CAAACGAGCC TGAACAACCA 
CAGGAGATTC CATGA 

 

Protein sequence

MAIDPIIQDP ALLRRLLRAK DRMDAASHEE WPVERLAQVS GVSEAHFARS FKQAFGTPPH 
RYLLTRRIER AMALLRESDR PITDIAFETG WASLGTFGRT FRDITGSSPS AIRARAKATP 
QELGRVPVCI VNAAHRPHLT TAVSEKRRLA ADGTNEPEQP QEIP