| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5698 |
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| Symbol | |
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| ID | 7975751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 413169 |
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| End bp | 413987 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796280 |
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| Product | 4-hydroxy-2-oxovalerate aldolase |
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| Protein accession | YP_002947554 |
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| Protein GI | 239820369 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTCGC GCAACACCTT CAAGCACGCC CTCGCGGCGA AGATCCCGCA GATCGGCCTC
TGGTCGACGC TGCCCGACCC CTACATCTCC GAGCTGCTCG CGGGCGCCGG CTTCGACTGG
ATGCTGCTCG ATGCCGAGCA CACGCCCGGC GATCCGACCA CCATGCTGCG CCAGCTGCAG
GCGGTGCAGG CCGAGCGCGA TCGGCCCACC TCGGCCGTGG TGCGCCCGCC CTGGAACGAC
CCGGTGCTGA TCAAGCAGTA CCTGGACATC GGCGCGCAGA CGCTGCTGCT GCCCTTCGTG
CAGAACCGCG CCGAGGCCGA GGCCGCCGTG GCCGCCACGC GCTATCCGCC GAACGGCATC
CGCGGCATGG GCGGCACGGT GCGCGCCACC CGCTTCGGCC GCGACACCAG GTACGTGGCC
GAGGCCTCCA GCGAGATCTG CGTGCTGGTG CAGGTGGAGA CCGTGGAAGC GCTCGAGCAC
CTGGAGGACA TCGCAAACGT CGACGGTGTG GACGGCGTCT TCATCGGCCC CGGCGACCTG
TCGGCCAGCA TGGGCGTGGC CGGCCAGGTC AACCACCCCA CGGTGCGCGC CGCCATCGAC
CGCGCCATCG CGCGCATCCT CGCCTGCGGC AAGGCGCCCG GCATCCTCAT GAACGACGAG
CCGCGCGCGC GCGAGCTGCT CGACCTTGGC GCGCTCTTCG TGGCGGTGGC CAACGACCAG
CTGCTGCTGC GCAAGAGCGC CGACGACATC GCCGCGCGTT TCAAGCAGCG CGGCGCACCC
GCCGCCCCCG CCTCGGCGCC GGCCCCCGCC ACCTATTGA
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| Protein sequence | MPSRNTFKHA LAAKIPQIGL WSTLPDPYIS ELLAGAGFDW MLLDAEHTPG DPTTMLRQLQ
AVQAERDRPT SAVVRPPWND PVLIKQYLDI GAQTLLLPFV QNRAEAEAAV AATRYPPNGI
RGMGGTVRAT RFGRDTRYVA EASSEICVLV QVETVEALEH LEDIANVDGV DGVFIGPGDL
SASMGVAGQV NHPTVRAAID RAIARILACG KAPGILMNDE PRARELLDLG ALFVAVANDQ
LLLRKSADDI AARFKQRGAP AAPASAPAPA TY
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