| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5685 |
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| Symbol | |
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| ID | 7975738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 398432 |
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| End bp | 398938 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796267 |
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| Product | blue (type 1) copper domain protein |
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| Protein accession | YP_002947541 |
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| Protein GI | 239820356 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4454] Uncharacterized copper-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCACA GCATCCTCCG CAACGCTGCC CTCGCAGCAC TCTGCGCCCT GGCGGCCGCA
GGCGCCTCTG CCACCGGCAA CCACGCCGGC GGGCATGGCC ACGGCGACGC CGAAGCCGCG
ATCGGCCAAC CCGGCGTGGC CGCCAAGGCC ACGCGAACCA TCAACGTCGA CATGACCGAC
GGCATGCGCT TCACGCCCGC CGACATCAAG GTGAAGCAGG GCGAGACCGT GCGCTTCGTC
GTCAAGAACT CCGGCCAGCT GAAACACGAG CTCGTGCTCG GCACCGAGAA GGAACTCAAG
GAGCACTACG AAGCCATGAA GAAGAACCCC GAGATGGAAC ACGCCGATCC CAACATGGTG
ACCTTGGCCG CAGGCAAGAG CGGCGAGATC GTGTGGCAGT TCACCAAGGC CGGCAAGGTC
GACTTCGCAT GCCTGCAACC GGGCCACTAC GACGCCGGCA TGAAGGGCGC CGTGACGGTG
GCCGGCAAGA CCGCTGCCGC CAAGTAA
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| Protein sequence | MKHSILRNAA LAALCALAAA GASATGNHAG GHGHGDAEAA IGQPGVAAKA TRTINVDMTD
GMRFTPADIK VKQGETVRFV VKNSGQLKHE LVLGTEKELK EHYEAMKKNP EMEHADPNMV
TLAAGKSGEI VWQFTKAGKV DFACLQPGHY DAGMKGAVTV AGKTAAAK
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