| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5676 |
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| Symbol | |
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| ID | 7975729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 382976 |
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| End bp | 383914 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796259 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_002947533 |
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| Protein GI | 239820348 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.727841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCCA TCGCGAATTA TCGCGGGATC ATTCCCGCCA TTTCCTGCCC TTTCACCGCG
GACCACCGCA TCGATGAGCC GGCCCTGCGC AAGCTGGCCT CGTGGCTGGC GGGGCACGAC
GGCGTGGTGG CGGTCATGAC CAACGGCCAC ACCGGCGAGG TGTTCTCGCT GACGCCGGCC
GAACGCGCCG AGGTGACGCG CATCGTCGCC GACGAGCTGC GCGGCCGCAT GCCGGTGATC
TCGTCGATCG TGTGCGAAGG CCTGGCCGAA GCCGCCGAGC ATGCGCGCGC CGCCCAGGCC
GCCGGCGCGG CCGCGCTCGA CGTGATGCCG CCGCACCACT GGCTGCGCTT CGGCTTCACG
CCAGGCCATG CGCTGCAGTA CTTCGAGGCC ATCCACCGCG CGGCGCCGGA GCTCGACCTG
GTCTGCCACG TGTACCCGGC CTGGACCCGC GCCTCCTATT CGTCGCAATT GCTGGCCGAG
CTGGCCCGCC TGCCCTACCT GCAGGCCTTC AAGGTCGGCC AGCGCGACAT GAACAAGTAC
GCCCGCGACA TCCAGGCGAT CCGCGAGGCC GACGCCTCCA AGGCCATCCT CACCTGCCAC
GACGAGTACC TGCTGGCTTC GATGGTGCAA GGCGTGGACG GCGCGCTGGT CGGCTTTGCC
ACTTTCATCC CGCAACTGAT CATCGACCTG TGGAACGCGG TCAAGGCCGG CGACCTGAAG
AAGGCGATGG CGGTGCAGGC CCTGATCACG CCGCTGAAGG ACGCGGTGTA CGGCGGCGGC
GAGCCGACCG GCGAGGCGCA TGCGCGCATG AAGGGCGGCA TGTACCTGGC CGGCGTGCTC
GACAACGCCA CGGTGCGCCC GCCGACCGAG GCGCCCAATG CGCGCGAGAT GGACGCGCTG
CGCGCCGCCG TGGCGCAGGC CGGGCTGTCG AGGCGCTGA
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| Protein sequence | MPSIANYRGI IPAISCPFTA DHRIDEPALR KLASWLAGHD GVVAVMTNGH TGEVFSLTPA
ERAEVTRIVA DELRGRMPVI SSIVCEGLAE AAEHARAAQA AGAAALDVMP PHHWLRFGFT
PGHALQYFEA IHRAAPELDL VCHVYPAWTR ASYSSQLLAE LARLPYLQAF KVGQRDMNKY
ARDIQAIREA DASKAILTCH DEYLLASMVQ GVDGALVGFA TFIPQLIIDL WNAVKAGDLK
KAMAVQALIT PLKDAVYGGG EPTGEAHARM KGGMYLAGVL DNATVRPPTE APNAREMDAL
RAAVAQAGLS RR
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