Gene Vapar_5649 details

Gene Information

• Locus tag: Vapar_5649
• ID: 7975261
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 355210
• End bp: 355902
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644796233
• Product: hypothetical protein
• Protein accession: YP_002947507
• Protein GI: 239820322

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00621516
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCGCA ATCTCGCAGC GTCCGTCCGC GCCCGCTTGA AGCAGCGAGC CGATGCCACG 
AGACAGGACT TCAACCTGAC GCTCACCCGC TACGGGCTGG AGCGGCTGTT GTACCGGCTC 
TCGGTGTCGC CGCATGCAGC CAACTACCTG CTCAAGGGTG CGCTGCTGTT TTCGCTGTGG 
TACGACCAGC CGCATCGGCC GACGCGCGAC GCAGATCTGC TGGGCTTTGG TCCGGATGAC 
GTCGACACCG CGGTATCGGC TTTCCGCGAG ATCTGCCAGA TCGAAGTGGA CGACGGCATC 
GCGTTCGACG CAGCCTCGGT CAGGGGCTCG GTGATCCGCA AGGAGGCGGG CTACGGCGGC 
GTACGGATCG ACTTGCTTGC GAAGTTGGAC GGCGCGCGCC TCGCGCTGCA AGTGGATATC 
GGCTTTGGCG ATGCGGTCAC GCCGGCACCC GAACCGGTGA GCTACCCGGT GCTGCTCGAA 
GACCTGTCCG CGCCGCAACT GCGCGCCTAT CCGAAATACA CGGTGGTCGC CGAGAAGTTT 
CATGCGGTGT GCCTGCTGGG CATGGCCAAT ACCCGCATGA AGGACTACTT CGATCTCTGG 
GTGCTGCTCA CCGAGGGTGC GCTGGAAGCC GCCGAACTGC GCCGCGCGAT CGCGCTGTTG 
CGCGGCGAAT TCCAGAAGCT CGGAACTGCC TGA 

 

Protein sequence

MSRNLAASVR ARLKQRADAT RQDFNLTLTR YGLERLLYRL SVSPHAANYL LKGALLFSLW 
YDQPHRPTRD ADLLGFGPDD VDTAVSAFRE ICQIEVDDGI AFDAASVRGS VIRKEAGYGG 
VRIDLLAKLD GARLALQVDI GFGDAVTPAP EPVSYPVLLE DLSAPQLRAY PKYTVVAEKF 
HAVCLLGMAN TRMKDYFDLW VLLTEGALEA AELRRAIALL RGEFQKLGTA