| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5593 |
|---|
| Symbol | |
|---|
| ID | 7975205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012792 |
|---|
| Strand | + |
|---|
| Start bp | 300973 |
|---|
| End bp | 301359 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644796177 |
|---|
| Product | glutathione-dependent formaldehyde-activating GFA |
|---|
| Protein accession | YP_002947451 |
|---|
| Protein GI | 239820266 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3791] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.876476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGCG AGGCTCCTTC CGAAGAAGCC TGCGCGTGGC AGCAGGGGCG CTGCCACTGC
GGCGCGGTGC GCTTCGAGTT CGTGCTGGCG TCGCACAAGG GCGTGAGCTG CAACTGCAGC
TACTGCGTGC GCAAGGCGGC GCTGCACCAC CGCGTGCCGG CCGGCAACTT CCGCCTGCTC
ATGGGCGCGG AGCAGCTGTC GAGCTACCGC TTCGGCACCA TGCGCGCACG CCACTTCTTC
TGCAGGACCT GCGGCATCCA TACGCACTGC CATCCGCGGT CGGCCCCCGG CGAGGTCAAT
GTCAACCTGC ATTGCGTCGA CGCGCTGCAG GATGCGCGCA TCGAGCTTTC CCTGCACGAC
GGCCGCAGCT GGGCCGCAGT GCCGTAG
|
|---|
| Protein sequence | MSGEAPSEEA CAWQQGRCHC GAVRFEFVLA SHKGVSCNCS YCVRKAALHH RVPAGNFRLL
MGAEQLSSYR FGTMRARHFF CRTCGIHTHC HPRSAPGEVN VNLHCVDALQ DARIELSLHD
GRSWAAVP
|
|---|
| |