| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5587 |
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| Symbol | |
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| ID | 7975199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 293999 |
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| End bp | 295129 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796171 |
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| Product | Saccharopine dehydrogenase |
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| Protein accession | YP_002947445 |
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| Protein GI | 239820260 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0890714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAAGC TGCAAGTCAA GAATGTTCTG GTGCTGGGTG CGGGCAAGGT GGGCAGCACG
GTGGCGGACA TGATCGCCGA ATACCACCGC ATCCCGGTGA CGCTGGCCGA CCAGCGCGCC
GGCACGCCGT CCAATGATCC GCTGGTGCGG CAGATCACGC TGAACGTGGA GGACGAAGCG
GCGCTGGCCG GCGAACTGGC CGCGCACACG GTGGTCATCA ACGCGCTGCC GTTCTTCCTG
GCCGCGCGCG TGGCCACGCA GGCGGCGCGG CTGGGCGTGC ACTACTTCGA CCTCACGGAG
GACGTGGCGG CCACGCATGC GATCCGCCAG CTTTCCGACG AAGCCACGTC GGTGCTGATG
CCGCAAAGCG GCCTCGCGCC CGGCGTGATT GGCATGCTCG GCGGGCACCT GGCGGGGCAC
TTCGACGAGC TCTACGATCT GCGCCTTCGC GTCGGCGCGC TCACGCGCAA TGCCACCAAC
AGCCTGCGCT ACAACTTCAC CTGGAGCATC GACGGCGTCA TCAACGAGTA CTGCAACGCC
TGCGATGCGA TCGTGAACGG CCAGCTCGTG TCGGTGCAGG CGCTGGAGGG CCATGAGACC
TTCACGCTCG ACGCCGAGGC CTTCGAGGCC TTCAATACAT CCGGCGGCCT GGGCACGCTG
TGCGAGACGC TGCGCGGCAA GGTGCGCAAC CTCGACTACA AGACCATCCG CTATCCGGGC
CACCGCGATG CGATGAACTT CCTCTTGCAC GACCTGCGCC TGATCGAGCG CCGCGACCTG
CTGCGCCAGG TGCTCGAGCA CGCGGTGCCG CACAGCCGCG AAGACGTGGT GATCGTGTTC
GCGTCGGCCT CGGGCATGCG CGGCGGCCGC TTCGAGCAGG AAACCCGCCT GGGCCGCGTG
TTCGGCGCCA GGCTTCGCGG CAAGGACCGC ACCGCCATCG AGCTCACCAC GGCGGCCGGC
GTGGTCGGCG TGTTCGAGCT GCTGCAGCAA GGCAAGCTGC CCCGCGCCGG CTTTGTCGGG
CAGGAGCAGG CGCCGCTCGA GGCCTTTCTC TCGACGCGCG TGGGCCACTA CTACCAGGGG
CTTGGCGTGA GCGCCTCCAG CCCTTCGCAG CAGAAGCTCG CCGAAGCCTG A
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| Protein sequence | MSKLQVKNVL VLGAGKVGST VADMIAEYHR IPVTLADQRA GTPSNDPLVR QITLNVEDEA
ALAGELAAHT VVINALPFFL AARVATQAAR LGVHYFDLTE DVAATHAIRQ LSDEATSVLM
PQSGLAPGVI GMLGGHLAGH FDELYDLRLR VGALTRNATN SLRYNFTWSI DGVINEYCNA
CDAIVNGQLV SVQALEGHET FTLDAEAFEA FNTSGGLGTL CETLRGKVRN LDYKTIRYPG
HRDAMNFLLH DLRLIERRDL LRQVLEHAVP HSREDVVIVF ASASGMRGGR FEQETRLGRV
FGARLRGKDR TAIELTTAAG VVGVFELLQQ GKLPRAGFVG QEQAPLEAFL STRVGHYYQG
LGVSASSPSQ QKLAEA
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