| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5566 |
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| Symbol | |
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| ID | 7975423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 275773 |
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| End bp | 276666 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796150 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_002947424 |
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| Protein GI | 239820239 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.122497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACA CCAAAGCCTC GGTCCAGGCC TTCTTCGACC CGCGCACCGG CACCGTCTCC
TACCTCGTGT GGGACCCGGG CAGCCTGCGT GCCGCCGTGA TCGACCCGGT GCTCGACTAC
GACTTCAAGT CGGGCCACAC CGGCACCGCG TCGGTGGACC GGGTGCTGGC CTGCGTGGCC
GAGCACGGGC TGCAGGTCGA CTGGATCCTG GAGACCCATG CCCATGCCGA CCACCTCTCG
GCGGCCAGCC ATCTGCAGGA GCGGCTCGGC GGGCGCATTG CCATCGGCGA GCACATCCGC
ACGGTGCAGG CCACCTTCAA GACGCTGTTC AACCTGGAGC GCGGCTTCCT GCCCGACGGC
AGCCAGTTCG ACCACCTGTT CAAGGACGGC GAGACCTTCC GCATCGGCGC CATCGAAGCC
ACCGCGATCC TGGTGCCCGG CCACACGCCT GCCGACATGG CCTACCTGAT CGGCGGCGCG
GTGTTCGTCG GCGACACGCT CTTCATGCCG GACCTCGGCA GCGCGCGGGC CGACTTCCCG
GGCGGCGATG CGCGCCAGCT GTACGCATCG ATGCGCCGGC TGCTGGACCT GCCGCCCGAG
ACGCCGGTGT ATGTCTGCCA CGACTATCCG CCGCCCTCGC GGCCGGCGCA ATGGCAGACC
ACCGTGGCCG AGCAGCGCGC CCGCAACATC CACGTGCGCG ACGGCATCGG CGAGGACGAA
TTCGTGGCCA TGCGGCGCGC GCGCGACGCC ACGCTCGAAG TGCCGACGCT GATCCTGCCG
TCGATCCAGG TCAACGTGCG TGCCGGCCGG CTGCCGCCGC CCGACGGCAA CGGCGTGTCC
TACCTGCGCA TTCCGCTCAA CGCGCTGCCG GTTCGCGCAA GCTGCGGCGC CTGA
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| Protein sequence | MNNTKASVQA FFDPRTGTVS YLVWDPGSLR AAVIDPVLDY DFKSGHTGTA SVDRVLACVA
EHGLQVDWIL ETHAHADHLS AASHLQERLG GRIAIGEHIR TVQATFKTLF NLERGFLPDG
SQFDHLFKDG ETFRIGAIEA TAILVPGHTP ADMAYLIGGA VFVGDTLFMP DLGSARADFP
GGDARQLYAS MRRLLDLPPE TPVYVCHDYP PPSRPAQWQT TVAEQRARNI HVRDGIGEDE
FVAMRRARDA TLEVPTLILP SIQVNVRAGR LPPPDGNGVS YLRIPLNALP VRASCGA
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