| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5557 |
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| Symbol | |
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| ID | 7975414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 259202 |
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| End bp | 260554 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796141 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002947415 |
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| Protein GI | 239820230 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCCA CGTCCCTCAC ACAGGCCGCA TCCGGCGCGC CGCCGCGCCT GTTCGACAAC
CGCTGGCTGC AACTGGCCGT CGGCATCGTC TGCATGATTG CCACGGCCAA CATCCAGTAC
GCATGGACCT TGTTCGTGCC GGAGATCCAG GGCAAGTTCG GCTGGGAGCG CGCATCGATC
CAGATTGCCT TCACCATCTT CGTGCTGGTG CAGACCTGGC TCGCGCCGAT CGAGGGCTAC
TTCATCGACA AGTTCGGGCC GCGGCTCATC GTGGCCTTCG GTGCGCTGTT CATCGGCGCG
GCCTGGGCCA TCAACTCGCA GGCCACGACG CTGATGGGCT TCTACATCGG CGCGGCCATC
GGCGGCATCG GCGTGGGTTC GATCTACGCC ACCTGCATCA ACAACGCGCT CAAGTGGTTT
CCCGACCGGC GCGGCCTGGC GGTGGGCCTG ACGGCCGGCG GCTACGGCGC GGGCTCGGCC
GCCACCATCC TGCCGATCGC CGCGATGATC GAGAGCTCCG GCTTTCAGCA GGCCTTCCTG
TTCTTCGGCC TGCTGCAGGG CTCGCTGGCC TTCATCGCGG CCTGGTTCCT GCGCGCACCC
AAGGGCAACG AAGTGCGGGG CTCGACCAAG CTCGCGCAGA GCCGGCGCGA CTACACGCTG
GGCGAGGCGC TTCGCACGCC GCTGTTCTGG CTGATGATCC TGATGTTCTC CTGCGTGGTC
ACCGGCGGCA TGATGGCCGT GGCGCAACTG GGCGTGATCG CGCAGGACCT GGGCGTGAAG
AACTTCAAGG TGGACCTGTA CTTCGTCACC ATGGCCGCGC TGCCGCTCGC GCTGATGCTC
GACCGTGTCA TGAACGGCAT CTCGCGCCCG CTGTTCGGCT GGATCTCCGA CCACATCGGC
CGCGAGAAGA CCATGGTGAT CGCCTTCACG CTGGAAGGCA TCGGCATCAT CGCGCTGGGC
TACTTCGGCC ACAACCCGTG GGCCTTCCTG ATCTTGTCGG GCGTGGTCTT CCTGGCCTGG
GGCGAGGTGT ACTCGCTGTT CTCTGCGTTG GCGGGCGATG CCTTCGGCAC CAAGCACATC
GGCAAGATCT ATGGCGTGCT GTATTGCGCC AAGGGCGTCG GCGCGCTGTT CGTGCCGCTC
GGCAATCTGA TGATGGAAGC CACCGGCACC TGGTCGACCG TGCTCTACAC AGTCGCGGCG
CTCGACCTGT TCGCCGCCTT CCTGGCGATC GTCGCGCTGC GGCCGATGCT CGCAAGGCAC
ACCGCCAGCA ATGCCGCCGC ATCGCATGCG CCTTCGCCAG CGCCTGATCT CGCAATGCCC
GGCGGCCTGT CGCCTGCAGG CCGCACGGCC TGA
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| Protein sequence | MNPTSLTQAA SGAPPRLFDN RWLQLAVGIV CMIATANIQY AWTLFVPEIQ GKFGWERASI
QIAFTIFVLV QTWLAPIEGY FIDKFGPRLI VAFGALFIGA AWAINSQATT LMGFYIGAAI
GGIGVGSIYA TCINNALKWF PDRRGLAVGL TAGGYGAGSA ATILPIAAMI ESSGFQQAFL
FFGLLQGSLA FIAAWFLRAP KGNEVRGSTK LAQSRRDYTL GEALRTPLFW LMILMFSCVV
TGGMMAVAQL GVIAQDLGVK NFKVDLYFVT MAALPLALML DRVMNGISRP LFGWISDHIG
REKTMVIAFT LEGIGIIALG YFGHNPWAFL ILSGVVFLAW GEVYSLFSAL AGDAFGTKHI
GKIYGVLYCA KGVGALFVPL GNLMMEATGT WSTVLYTVAA LDLFAAFLAI VALRPMLARH
TASNAAASHA PSPAPDLAMP GGLSPAGRTA
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