Gene Vapar_5543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5543 
Symbol 
ID7975400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp247411 
End bp247764 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content62% 
IMG OID644796128 
Productglutathione-dependent formaldehyde-activating GFA 
Protein accessionYP_002947402 
Protein GI239820217 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACGA ATTACCAAGG CAGCTGCCAC TGTGGCCGGA TCGCCTTCGA GGTCGAGGGC 
GACATCCAGG GGGCGATGGC CTGCAACTGC TCGATGTGCC AGCGCAAGGG GTCGCTGCTG
TGGTTCGTGC CGCACGAGCG GCTTCGGCTG AAGACGCCGC CCGAGGACAT CAGCACCTAC
CTGTTCAACA AGCATCTGAT CTCGCATCGC TTCTGCGCAG TCTGCGGCAT TCATCCCTTT
GGCGAAGGCA CCGATCCCAA GGGCAACAGG ATGGCGGCCA TCAACATCCG CTGCCTCGAA
GGCATCGACC TGGATGCAGT GCCGGTGCAG CATTTCGACG GGCGTTCGAA GTAG
 
Protein sequence
MTTNYQGSCH CGRIAFEVEG DIQGAMACNC SMCQRKGSLL WFVPHERLRL KTPPEDISTY 
LFNKHLISHR FCAVCGIHPF GEGTDPKGNR MAAINIRCLE GIDLDAVPVQ HFDGRSK