Gene Vapar_5494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5494 
Symbol 
ID7975351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand- 
Start bp197251 
End bp197799 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content72% 
IMG OID644796081 
Productgamma-BHC dehydrochlorinase 
Protein accessionYP_002947355 
Protein GI239820170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.766656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCT CCGTGCCGGG GCCGGCAACG CTGCAGGAGT TGCTGGACCG CGAGGCGATC 
CGCGACTGCC TGCTGCGCTA CTGCCGAGGC ATCGACCGCT GCGACGAACA AGCCCTGCGT 
TCGGCCTACT GGGAGGACGC CACGGACTGC CACGGCGCCT GGAACGGCAG CGCCGCCGGC 
TTCATCGATC AGGCGCTGGC CAAGCTGCGG CAGGGCGGAC GCCGCGTCCA CCAGATCGGC 
AATGTGCTGA TCGAGCTGCA CGGCGATGCC GCGGCGGTGG AAAGCAGCTT CTTCGCATTG 
CAGGCCACGG CCGCGCAGCC CGATCGCGAG ACCTTCCTCT GCGGCCGCTA TGCGGACCGC 
TTCGAGCGCC GCGGCGGCGA GTGGCGCGTG GCCGCGCGCA CCGTGATCTA CGACTGGATC 
GAGGAGCGCA CGCGGCCCGA GCTGAAGCAG GCCGACGCCG CCTTGTTCGG CGCGCGCCAG 
CCGGTGGGCA CCGCGGCGCC GCACGACGCC GTCTATGCGC TGCTGCGCGC AGTGCGGGGC 
GGCGCCTGA
 
Protein sequence
MSASVPGPAT LQELLDREAI RDCLLRYCRG IDRCDEQALR SAYWEDATDC HGAWNGSAAG 
FIDQALAKLR QGGRRVHQIG NVLIELHGDA AAVESSFFAL QATAAQPDRE TFLCGRYADR 
FERRGGEWRV AARTVIYDWI EERTRPELKQ ADAALFGARQ PVGTAAPHDA VYALLRAVRG 
GA