| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5455 |
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| Symbol | |
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| ID | 7975149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 158247 |
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| End bp | 159356 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796043 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_002947317 |
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| Protein GI | 239820132 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.262852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTCCA TCGCGAAAGT CACGAGCCAG CTCTTCAAGG TTCCCCTCGC TGAAGTCCTG
ACGGACGCCA AGCACGGCGC GCACACCCAT TTCGAACTGG TGACTGCAAC GGTGGTGCTT
TCGGATGGCA GCCGGGGCAC GGGCTACACC TACACCGGCG GCAAGGGAGG ACATGCGATC
AAAGCCATGA TCGACCACGA CCTGGCGCCC GCGATGATCG GCATGGACGC GGCGGATGTC
GAAGGCATCC ACGATTTCAG CCAGTGGCAT GTGCACTATG TCGGCCGCGG CGGCATCGCG
TCGTTTGCGA TCTCCGCGAT CGACATCGCG CTCTGGGACC TCCGCGGCAA GGCCGCAGGC
CAGCCGCTCT GGCAACTGGC GGGCGGCGCT GCGGACACCT GCAATGCCTA CTGCGGGGGC
ATCGACCTGG CGTTTCCGCT CGAGAAGCTG CTGGACAACG TGCGCGGCTA TCTCGCCAAG
GGTGCCGGCG GCGTCAAGAT CAAGATCGGC CGCCCGAACC TCGACGAAGA CATCGAGCGC
ATCCGGGCGG TGCGGCAACT GATCGGCGAC GGCATGGCCT TGATGGTGGA TGCCAACTAC
GCGATGAACG TGGACCAGGC CATCGCTGCG GCCGAGCGCA TCAAGCCCTT CGGTGTCCTG
TGGTTCGAGG AGCCGACCAT TCCGGACGAC TACCGGGGCT ATGCGCGCAT CGCGGCCGCG
ACCGGCGTTC CGTTGGCAAT GGGCGAGAAC CTGCACACGA TCCATGAATT CGATCATGCG
TTCGAGCAGG CGCGGCTCTC CTTCATCCAG CCGGACGCCT CGAACTGCGG CGGCATCACG
GGTTGGCTGA AGGTGGCCGA GCGCTCGCGC CGCCACGGGA TCCCGGTGTG CTCGCATGGC
ATGCAGGAGT TGCATGTGAG CTTGCTGGCG GCGCAGCCGA ACGCAGGCTG GCTGGAGATC
CACAGTTTTC CGATCGACGA GTACACGATG CGGCCGCTGG TTCTTGAGAA CCATCGCGCC
GTGGCACCGG ACGAGCCGGG CGTCGGGGTG GACTTCGACT GGGCGAAACT TGCGCCGTAC
CTGGTTGATC CGTCCCGGGG CTCTTCGTGA
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| Protein sequence | MRSIAKVTSQ LFKVPLAEVL TDAKHGAHTH FELVTATVVL SDGSRGTGYT YTGGKGGHAI
KAMIDHDLAP AMIGMDAADV EGIHDFSQWH VHYVGRGGIA SFAISAIDIA LWDLRGKAAG
QPLWQLAGGA ADTCNAYCGG IDLAFPLEKL LDNVRGYLAK GAGGVKIKIG RPNLDEDIER
IRAVRQLIGD GMALMVDANY AMNVDQAIAA AERIKPFGVL WFEEPTIPDD YRGYARIAAA
TGVPLAMGEN LHTIHEFDHA FEQARLSFIQ PDASNCGGIT GWLKVAERSR RHGIPVCSHG
MQELHVSLLA AQPNAGWLEI HSFPIDEYTM RPLVLENHRA VAPDEPGVGV DFDWAKLAPY
LVDPSRGSS
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