| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5439 |
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| Symbol | |
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| ID | 7975133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 141378 |
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| End bp | 142835 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796027 |
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| Product | Catalase |
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| Protein accession | YP_002947301 |
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| Protein GI | 239820116 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0753] Catalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT CATCCGACAC CCCGCGCCAG ACCTCCCTGA CCACCGCCTT CGGCGCCCCC
GTGCCCGACA ACCAGAACAG CCTCACGGCC GGCCCGCGCG GCCCGCTGCT GACGCAGGAC
GTGTGGCTGC TCGAAAAGCT CGCCAACTTC AACCGCGAGG TCATCCCGGA GCGCCGCATG
CACGCCAAGG GCTCCGGCGC CTTCGGCAGC TTCACCGTCA CGCAAGACAT CACGCGGTAC
ACCCGCGCCA AGCTCTTCAG CGCCGTGGGC AAGAAGACCG AGATGTTCGC GCGCTTCACC
ACGGTGGCCG GCGAGCGCGG CGCGGCCGAT GCCGAACGCG ACATCCGCGG CTTCGCGCTC
AAGTTCTATA CGGAAGAAGG CAACTGGGAC CTGGTGGGCA ACAACACGCC CGTGTTCTTC
CTGCGCGACC CGCGCAAGTT CCCGGACCTG AACAAGGCCG TCAAGCGCGA CCCCCGCACC
AACCTGCGCA GCGCCACCAA CAACTGGGAC TTCTGGACGC TGCTGCCCGA GGCGCTGCAC
CAGGTCACCA TCGTGATGAG CGACCGCGGC ATCCCGGCCA GCTACCGCCA CATGCACGGC
TTCGGCTCGC ACACCTACAG CTTCGTCAAT GCGCAGGACG AGCGCTTCTG GGTCAAGTTC
CACTTCAGGA CGCAGCAGGG CATCAAGAAC CTCACCGATG CCGAGGCCGC GGCCCTGGTC
GGCGGCGACC GCGAGAGCCA CCAGCGCGAC CTGTTCGAGG CCATCGAGGG CGGCGACTTC
CCCAGGTGGA CGCTCTCCGT GCAGGTGATG CCCGAAGCCG ATGCAGAGAA GGTGCCCTAC
CACCCCTTCG ACCTGACCAA GGTCTGGCCC AAGAAGGACT ACCCGCTGAT CGAGGTGGGC
GTGATGGAGC TGAACCGCAA TCCCGCGAAC TTCTTCGCCG ACGTGGAGCA GAGCGCATTC
GCGCCCAGCA ACCTGGTGCC CGGCATCGGC GTATCGCCCG ACAAGATGCT GCAGGCGCGC
CTCTTCGCCT ATTCGGATGC GCAGCGCTAC CGCCTGGGCG TGAACCACCA CCAGATCCCG
GTGAACGCCG CGCGCTGCCC GGTGCACAGC AACCACCGCG ACGGCGCGAT CCGGGTGGAC
GGCAACTACG GCGCCGCGCC GCACTACGAG CCCAACAGCT TCGGCCAGTG GCAGGAGCAG
CCCGGCTACC GCGAGCCGCC GCTCAGGCTG CGCGGCGATG CGGACTTCTG GAATTTCCGC
GAGGACGATG CCGACTACTA CAAGCAGCCC GGCGACCTGT TCCGCCTGAT GACGCCGGCG
CAGCAGCAGG TGCTGTTCGA CAACACGGCG CGCGCCATGG GCGATGCGCC CGAGTTCATC
AAGCGCCGCC ACATCGGCAA CTGCGCCAAG GCCGATGCGG CGTACGGCGC GGGCGTGGCA
AAGGCGCTGG GTCTCTAA
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| Protein sequence | MSDSSDTPRQ TSLTTAFGAP VPDNQNSLTA GPRGPLLTQD VWLLEKLANF NREVIPERRM
HAKGSGAFGS FTVTQDITRY TRAKLFSAVG KKTEMFARFT TVAGERGAAD AERDIRGFAL
KFYTEEGNWD LVGNNTPVFF LRDPRKFPDL NKAVKRDPRT NLRSATNNWD FWTLLPEALH
QVTIVMSDRG IPASYRHMHG FGSHTYSFVN AQDERFWVKF HFRTQQGIKN LTDAEAAALV
GGDRESHQRD LFEAIEGGDF PRWTLSVQVM PEADAEKVPY HPFDLTKVWP KKDYPLIEVG
VMELNRNPAN FFADVEQSAF APSNLVPGIG VSPDKMLQAR LFAYSDAQRY RLGVNHHQIP
VNAARCPVHS NHRDGAIRVD GNYGAAPHYE PNSFGQWQEQ PGYREPPLRL RGDADFWNFR
EDDADYYKQP GDLFRLMTPA QQQVLFDNTA RAMGDAPEFI KRRHIGNCAK ADAAYGAGVA
KALGL
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