Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5429 |
Symbol | |
ID | 7975123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 134320 |
End bp | 135513 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644796017 |
Product | OsmC family protein |
Protein accession | YP_002947291 |
Protein GI | 239820106 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1765] Predicted redox protein, regulator of disulfide bond formation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCACCC GCCCCTTCGA ATTCCTCAAC CGGAACGGAC ACCGCCTGTC GGGCAGCCTT GAAATGCCGG AGGGCATCCC GCGGGGTTGG GCGTTGTTCG CGCACTGCTT CACCTGCGGC AAGAACAACC TCGCGGCCGT ACGCATCGCG CGGACGCTGG CCAGCGTGGG GATCGGGGTG CTGCGCTTCG ACTTCACCGG GCTGGGCGGC AGCGAAGGGA ATTTCGCCGA CGCGAGCTTC TCGCTGAACG TGCAGGACCT GGTGTCGGCC GCCAGCGCCA TGGAGGCCGC CGGTATGCCG CCCCGCCTGC TCATCGGCCA CAGCCTCGGC GGCTCCGCCA TGCTCGCTGC GGCGGACCGC ATTGCGGGCG CGCACGCCAT CGCGACCATT GCCGCGCCGT TCGATGTGGC GCAGGTGCTG CACCTGCTGG ACCCCGCGGG TCTTGCGCGC CTCCAGACCG AGGAACAGGC GCTGGTCCAG GTGGTCGGGC GGCCGATGGC GGTCGGCAAG GCCTTTGTGG ACGACCTGCG CACGCATGAC CCGGGGGCGC GCATCGCGGC CCTGCACCGG CCGCTGCTGC TGCTCCATGC GCCGCAGGAC CGCACGGTCG ACATCGAGAA CGCCACGCGC ATCTTTCTGG CAGCGAGGCA CCCCAAGAGC TTCGTCTCGC TCGACGATGC GGACCACCTG CTGTCGAAGC GCGAGGACGC CGAACAGGTC GCGCGCCTCA TCGCAACCTG GGCGGACCGC TACCTGCCCG AGCCCGCCGC TGGCCGCCCG GTGGCGGCGG ATGCCGAGGC AGAAGAAACG GGCCTCGGAA AATTCCAGCT CGCGCTGCGC TCGGGCGGCT CGCGCTGGCT CGCGGACGAA CCCGAGACGG TGGGCGGGCT CGGTTCGGGC CCGACACCCT ACAACCTGCT GTCGTCCGCG CTCGCCGCCT GCACGACCAT GACGCTGCGC CACTACGCCG ACAGCAAGGG CTGGCCGGTC ACGCGCATCC GCACCGCGGT CAACCACCGC AAGGACAAGG CAATCTCCCC GCCCGACGTC TTCAGCCGGC GGGTGTCGAT CGACGGCGCC ATCACGGAGG CGCAACGCAC ACAGCTGCTC GACATGGCGC AGCGATGCCC CGTTCACCGC ACGCTCGAAG GCGGAGCGCG CTTCGAGCCT GTGGAAGGCG AGCCACCGGC CTGA
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Protein sequence | MPTRPFEFLN RNGHRLSGSL EMPEGIPRGW ALFAHCFTCG KNNLAAVRIA RTLASVGIGV LRFDFTGLGG SEGNFADASF SLNVQDLVSA ASAMEAAGMP PRLLIGHSLG GSAMLAAADR IAGAHAIATI AAPFDVAQVL HLLDPAGLAR LQTEEQALVQ VVGRPMAVGK AFVDDLRTHD PGARIAALHR PLLLLHAPQD RTVDIENATR IFLAARHPKS FVSLDDADHL LSKREDAEQV ARLIATWADR YLPEPAAGRP VAADAEAEET GLGKFQLALR SGGSRWLADE PETVGGLGSG PTPYNLLSSA LAACTTMTLR HYADSKGWPV TRIRTAVNHR KDKAISPPDV FSRRVSIDGA ITEAQRTQLL DMAQRCPVHR TLEGGARFEP VEGEPPA
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