Gene Vapar_5429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5429 
Symbol 
ID7975123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp134320 
End bp135513 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content71% 
IMG OID644796017 
ProductOsmC family protein 
Protein accessionYP_002947291 
Protein GI239820106 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1765] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCACCC GCCCCTTCGA ATTCCTCAAC CGGAACGGAC ACCGCCTGTC GGGCAGCCTT 
GAAATGCCGG AGGGCATCCC GCGGGGTTGG GCGTTGTTCG CGCACTGCTT CACCTGCGGC
AAGAACAACC TCGCGGCCGT ACGCATCGCG CGGACGCTGG CCAGCGTGGG GATCGGGGTG
CTGCGCTTCG ACTTCACCGG GCTGGGCGGC AGCGAAGGGA ATTTCGCCGA CGCGAGCTTC
TCGCTGAACG TGCAGGACCT GGTGTCGGCC GCCAGCGCCA TGGAGGCCGC CGGTATGCCG
CCCCGCCTGC TCATCGGCCA CAGCCTCGGC GGCTCCGCCA TGCTCGCTGC GGCGGACCGC
ATTGCGGGCG CGCACGCCAT CGCGACCATT GCCGCGCCGT TCGATGTGGC GCAGGTGCTG
CACCTGCTGG ACCCCGCGGG TCTTGCGCGC CTCCAGACCG AGGAACAGGC GCTGGTCCAG
GTGGTCGGGC GGCCGATGGC GGTCGGCAAG GCCTTTGTGG ACGACCTGCG CACGCATGAC
CCGGGGGCGC GCATCGCGGC CCTGCACCGG CCGCTGCTGC TGCTCCATGC GCCGCAGGAC
CGCACGGTCG ACATCGAGAA CGCCACGCGC ATCTTTCTGG CAGCGAGGCA CCCCAAGAGC
TTCGTCTCGC TCGACGATGC GGACCACCTG CTGTCGAAGC GCGAGGACGC CGAACAGGTC
GCGCGCCTCA TCGCAACCTG GGCGGACCGC TACCTGCCCG AGCCCGCCGC TGGCCGCCCG
GTGGCGGCGG ATGCCGAGGC AGAAGAAACG GGCCTCGGAA AATTCCAGCT CGCGCTGCGC
TCGGGCGGCT CGCGCTGGCT CGCGGACGAA CCCGAGACGG TGGGCGGGCT CGGTTCGGGC
CCGACACCCT ACAACCTGCT GTCGTCCGCG CTCGCCGCCT GCACGACCAT GACGCTGCGC
CACTACGCCG ACAGCAAGGG CTGGCCGGTC ACGCGCATCC GCACCGCGGT CAACCACCGC
AAGGACAAGG CAATCTCCCC GCCCGACGTC TTCAGCCGGC GGGTGTCGAT CGACGGCGCC
ATCACGGAGG CGCAACGCAC ACAGCTGCTC GACATGGCGC AGCGATGCCC CGTTCACCGC
ACGCTCGAAG GCGGAGCGCG CTTCGAGCCT GTGGAAGGCG AGCCACCGGC CTGA
 
Protein sequence
MPTRPFEFLN RNGHRLSGSL EMPEGIPRGW ALFAHCFTCG KNNLAAVRIA RTLASVGIGV 
LRFDFTGLGG SEGNFADASF SLNVQDLVSA ASAMEAAGMP PRLLIGHSLG GSAMLAAADR
IAGAHAIATI AAPFDVAQVL HLLDPAGLAR LQTEEQALVQ VVGRPMAVGK AFVDDLRTHD
PGARIAALHR PLLLLHAPQD RTVDIENATR IFLAARHPKS FVSLDDADHL LSKREDAEQV
ARLIATWADR YLPEPAAGRP VAADAEAEET GLGKFQLALR SGGSRWLADE PETVGGLGSG
PTPYNLLSSA LAACTTMTLR HYADSKGWPV TRIRTAVNHR KDKAISPPDV FSRRVSIDGA
ITEAQRTQLL DMAQRCPVHR TLEGGARFEP VEGEPPA