| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5410 |
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| Symbol | |
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| ID | 7975104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 116397 |
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| End bp | 117365 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795998 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_002947272 |
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| Protein GI | 239820087 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.459598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACCA CACAGAATCC TTCGCGCCGA CACCTGATTG CGACTGGCGC TGCCGTCGCC
ACCGGCACCC TCGCTTTCGG CATGCAGGAC GCAGCCGGCG CAGCAACCCG CATCCGGCCG
ACCCAAACTC CGAGCCCCTC GAGGACTGGC AGCACCATCA CCACCCCCGA CGGCACGCAG
ATCTACTACA AGGACTGGGG CGAAGGTCCC GTCGTCACCT TCTCCCACGG CTGGCCGCTC
AACGCCGACG CATGGGACGG ACAGATGCTC TTCCTGGCGC GCAACGGCTT TCGCGTCATC
GCGCACGACC GACGCGGGCA CGGCCGCTCG AGCCAGTCTT CGTCGGGTAA CGACATGAAC
GGCTATGCCG ACGACCTCGC GGTTCTGTTT GAGGCGCTCG ACCTGAAGAA GGTCACGATG
GTCGGCCACT CCACCGGCGG CGGCGAGGTG GCGCGCTACA TCGGGCGCCA CGGCAGCAAG
CGCGTGGTCA AGGCTGTGCT CATCGGCGCA GTGCCGCCGG TCATGCTCAA GTCCGCGGCG
AATCCCGAAG GCCTGGCGAT CGAAGTGTTC GACGGTCTTC GCGCCGGGGT CGCCGGCGAC
CGCTCGCAGT TCTACAAGGA GTTCGCCATC CCGTTCTTCG GCGCCAACCG CCCGGGCGCG
AAGGTGTCGC AGGGCATCCT GGACCAGTTC TGGCTCTGGA GCATGCAATG CGGGCAGAAG
AACTCCTACG AGTGCATCAA GGCCTTCTCC GAAACCGACT TCACCGAAGA CCTGAAGAAG
ATCGATGTGC CCACCCTGGT CATGCACGGC GAGGACGACC AGATCGTGCC CATCCACGAC
TCGGCGAAGA AGTCCGTGCA GCTGATCAAG GGCGCCAGGG CGATCTACTA CCCCGGTGCG
CCGCACGGGC TCACCGCCAC GATGCAGGAC AAGATCAATG CGGACCTGCT CACCTTCCTC
AAGAGCTGA
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| Protein sequence | MKTTQNPSRR HLIATGAAVA TGTLAFGMQD AAGAATRIRP TQTPSPSRTG STITTPDGTQ
IYYKDWGEGP VVTFSHGWPL NADAWDGQML FLARNGFRVI AHDRRGHGRS SQSSSGNDMN
GYADDLAVLF EALDLKKVTM VGHSTGGGEV ARYIGRHGSK RVVKAVLIGA VPPVMLKSAA
NPEGLAIEVF DGLRAGVAGD RSQFYKEFAI PFFGANRPGA KVSQGILDQF WLWSMQCGQK
NSYECIKAFS ETDFTEDLKK IDVPTLVMHG EDDQIVPIHD SAKKSVQLIK GARAIYYPGA
PHGLTATMQD KINADLLTFL KS
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