Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5387 |
Symbol | |
ID | 7975848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 92578 |
End bp | 93840 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644795981 |
Product | hypothetical protein |
Protein accession | YP_002947255 |
Protein GI | 239820070 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAGCA ACCACCAAGA CGTCATCATC CTGGGCGCCG GCATCGGCGG CCTCACCCTG GCCCTGAGCC TGCACCAGGC CGGGATTCCC TGCCGTGTGT ACGAAGCGGT CCCCGAACTC AAGCCGATGG GCGTAGGCAT CAACCTGCTG CCGCACGCGG TGCGCGAGCT CAGCGAACTG GGCCTGCTGC CCGCGCTGGA TGCGATTGCG GTGCGCACCA AGGAGGCTGT CTTCTTCACC GAGCACGGCC AGCTGGTCTT CACGGAGCCG GCCGGCACCG CGGCCGGCTA CGACTGGCCC CAGTTCTCGA TCCACCGTGG CGACCTGCAG GCCGTGCTGC TGGCCGCGGT GCGCGAGCGG CTGGGCGATG GCAGCGTGCT GTGCGGCCAC CGGTGCATCG ATGTCGACCA GGACGAGGCG GGTGTCACCG CCCGCTTCGC GGATGCCTCG GGCGAGGCCG TTGCCAGCGT ACGCGGCGCG GTCGCGATCG GCTGCGATGG CATCCATTCG GTGCTGCGCA AGAAGTTCTA TCCGGACGAA GGCGCTCCAC GCTATTCGGG CGTCAACATG TGGCGCGGCA CCACGCGCTG GAAGCCGATC CTGTCGGGCG CAAGCATGAT CCGGGCAGGC TGGCTTGCCG TGGGCAAGAT GGTGATCTAC CCGATCCGCG ACGCCATCGA CGCCGATGGC AACCAGCTCG TGAACTGGGT CGCCGAGATC GAAGCCGAGC AGCCGGCCGT GCGCGACTGG AGCCGCGAAG GCCGCCTGGA GGATTTCCTC CCCGCGTTCG AGAATTGGCA CTTCGACTGG CTGGACGTGC CGGCGCTGAT ACGCGCGGCC GACTCGATCC TGGAATACCC GATGGTCGAC CAGGACCCTT TGCCGCGCTG GACGCATGGC CGCATCACGC TGCTTGGCGA TGCCGCGCAC CCGATGGTGC CGCGTGGCTC GAACGGTGCC GGCCAGGCCA TCATCGACGC GCGCTGCCTC GCCGGCCGCC TGAAGAAGGA AGGCGTGGGC CCCGCGGCCC TGGAAAGCTA CGATCAGGAA CGGGTGCCGG CCACGGCCAA TGTCGTGCTC ACGAACCGGC GCACGCCGCC CGACGCGATC CTGCGCGAGG TCTACGAACG CTCCGGCGGC AAGCCGTTCG CCCGGATCGA CGACGTGGTG CCCCGGGCCG AACTCCAGGC GATTTCCGAT GCCTACAAGC GCGTGGCCGG CTACGACCCC GCACAGCTCA AGAATCGCCC TTCCTTCGTC TGA
|
Protein sequence | MSSNHQDVII LGAGIGGLTL ALSLHQAGIP CRVYEAVPEL KPMGVGINLL PHAVRELSEL GLLPALDAIA VRTKEAVFFT EHGQLVFTEP AGTAAGYDWP QFSIHRGDLQ AVLLAAVRER LGDGSVLCGH RCIDVDQDEA GVTARFADAS GEAVASVRGA VAIGCDGIHS VLRKKFYPDE GAPRYSGVNM WRGTTRWKPI LSGASMIRAG WLAVGKMVIY PIRDAIDADG NQLVNWVAEI EAEQPAVRDW SREGRLEDFL PAFENWHFDW LDVPALIRAA DSILEYPMVD QDPLPRWTHG RITLLGDAAH PMVPRGSNGA GQAIIDARCL AGRLKKEGVG PAALESYDQE RVPATANVVL TNRRTPPDAI LREVYERSGG KPFARIDDVV PRAELQAISD AYKRVAGYDP AQLKNRPSFV
|
| |