| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5365 |
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| Symbol | |
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| ID | 7975826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 71946 |
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| End bp | 72857 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795959 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947233 |
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| Protein GI | 239820048 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.853701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAGCC TGGATCTCCT GCGCACCTTC AGCGAGGTGG CCTCTTCCGG AAGCTTCTCC
CGCACCGCAA AGCACCTGGC GCTGTCGCGG GGCACCGTCA GCAAGTACAT CGCGGCCCTC
GAGCATCGCT TCGGCGTGCG GCTGCTGAAC CGGACCAATC GCGCCGTCAG CCTCACGGAC
GCAGGCCTCC TGCTGCTCGA CAGAAGCAGG CCGATTCTGG AACTGGCCGA CGTGACGCGC
GCCGAGCTGC AGGACCGCGC ACGGGTCCCG AGCGGGCGCC TGCGCGTCTC GGCGCCGCAC
GGCATGGACT TGACGCAGCT GCCGGCGCTG ATCAACGACT TCCTCGGCCA CTACCCCGAG
GTCAGCATCA GCCTCGTGCT CTCCAACCGC CTGGTCGACC TCACGGAGGA GGGCGTCGAC
ATCGCGCTTC GCTTCGCCCC CTCGGCCAAC GAGAACCTGA TCGTTCGAAA ACTGATGCCG
ATGGCGCTCA GCGTCTGCGC CGCGCCCATG TACTGGCGCA AGCACGGCGT GCCCGCCCAT
CCGGACGAGC TTGCGCATCA TGCCGCGCTG ATCAGCACCC AGCTGAATCC GCTGCCGAAG
TGGCGCTTCG AGGCCGACCG CCAGCCGATC GAGGTGGCAG TCCGCGGCCG GCTGGACGCC
ACGGAAGCCA GCCCGCTGAT CCAGGCGGCA CTGCTGGGCG CAGGCGTCGT CTACCTGCCG
TCGGTGATGC TCGAGCCCTA CATCGAGAGC GGGCGGCTGG TGCCCGTGCT GCCCACATTC
GTCCGCAGCG ACATGTGGCT CTCGGCCGTC TATCTGCAGC GCCGGCACAG CACGGCGGTG
CAGCGCGCGT TCCTGGATTT TCTGGCGGTG CGGCTCAAGC CTGCGGGCAA GGAGGGCAGG
GCAGCCGGTT GA
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| Protein sequence | MDSLDLLRTF SEVASSGSFS RTAKHLALSR GTVSKYIAAL EHRFGVRLLN RTNRAVSLTD
AGLLLLDRSR PILELADVTR AELQDRARVP SGRLRVSAPH GMDLTQLPAL INDFLGHYPE
VSISLVLSNR LVDLTEEGVD IALRFAPSAN ENLIVRKLMP MALSVCAAPM YWRKHGVPAH
PDELAHHAAL ISTQLNPLPK WRFEADRQPI EVAVRGRLDA TEASPLIQAA LLGAGVVYLP
SVMLEPYIES GRLVPVLPTF VRSDMWLSAV YLQRRHSTAV QRAFLDFLAV RLKPAGKEGR
AAG
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