| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5346 |
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| Symbol | |
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| ID | 7975807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 50849 |
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| End bp | 52066 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795940 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_002947214 |
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| Protein GI | 239820029 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.400198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCG GGACCATCGT CATCGTGGGC GCCGGCCAGG CCGGCGGCTG GGCCGCGCAG
ACGCTGCGCA GCGAGGGTTT CGCGGGACGC GTGGCGCTGA TCGGTGACGA GCCGCATCGC
CCCTACGAAC GCCCGCCGCT GTCCAAGGCG GTGCTCTCCG GGGACGCGCA TGCGGACACG
ACCCGCTTGC TGAAACCGGA GGCCTTCGAT GCGCTCGACA TCGACTGGCG GCCGAACGTC
GGCGCGACCT TCATCGACCG GGCGGCGAAG CAGCTCCACC TGACGCAGGG CGAGCATGTT
CCCTACGACA AGCTGATTCT CTGCAACGGC GGCCGGGCGC GCCGCCTGAA TATCCCCGGC
GCGGATCTGC CCGGCGTCTT CAGCCTGCGC AGCATCGAGG ACGCGGCGGC GCTCGGTGCC
GCGCTGTCGG CCGGCAGGCG GCTGCTCGTC ATCGGGGGCG GCTGGATCGG GCTCGAAGTG
GCCGCGACGG CGCGGAAGAA GGGCATGGAC GTGACCGTCG TCGAAGCGAT GGGCCGGCTC
TGCGAGCGCA CCGTTCCGCC GGAGATTTCC GGCTACCTGC TGCAGCTCCA CGCCACGCAC
GGCGTGGACG TTCGGCTCGG CACCGGCATC GAACGCCTGG CGCAGAACGC GCGAGGTGGC
CTCATGGCGT CATTCACCGA TGGGCGCGCG CTCGAATGCG ACGCGGTCCT CGTCGGTGTC
GGCCTGGTCC CCAACGACGA GCTCGCGCGC GAGGCGGGCC TGGCATGCGA TGGCGGCGTG
CGGGTCGATT CGCAATGCCG CTCATCCGAT CCGGACATCC TGGCCGCGGG CGACGTGGCC
ACATGGCACT GCGAATGGGC GGGGCGGCGG ATGCGGCTCG AATCATGGCA GAACGCCCAG
GAGCAAGGCA TTGCCGCTGC GCGCGCCGCG CTCGGCATCG CGGTGAACCA TCAGCCGCTG
CCCTGGTTCT GGTCCGACCA GTACGAGGTC AACCTGCAGA TCTTCGGCAT GCCCACGCCG
GCGCACGATG TGGTGGTGCG CGGCGACCGG AATTCCAGCA GCTTCGTGAT GTTCTTCCTG
GACGCCGGCA AGGTCGTTGC GGCGCTGGGC CCCAACGCCG CGCGCGACCT GCGCTTTGCG
CGGCGGCTGA TCGAGCGCCG CACCCGCGTC GATGCGGCGC AGCTCGCCGA CCTGCAGGTG
CCGCTCGCGA AGCTGTGA
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| Protein sequence | MSTGTIVIVG AGQAGGWAAQ TLRSEGFAGR VALIGDEPHR PYERPPLSKA VLSGDAHADT
TRLLKPEAFD ALDIDWRPNV GATFIDRAAK QLHLTQGEHV PYDKLILCNG GRARRLNIPG
ADLPGVFSLR SIEDAAALGA ALSAGRRLLV IGGGWIGLEV AATARKKGMD VTVVEAMGRL
CERTVPPEIS GYLLQLHATH GVDVRLGTGI ERLAQNARGG LMASFTDGRA LECDAVLVGV
GLVPNDELAR EAGLACDGGV RVDSQCRSSD PDILAAGDVA TWHCEWAGRR MRLESWQNAQ
EQGIAAARAA LGIAVNHQPL PWFWSDQYEV NLQIFGMPTP AHDVVVRGDR NSSSFVMFFL
DAGKVVAALG PNAARDLRFA RRLIERRTRV DAAQLADLQV PLAKL
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