| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5276 |
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| Symbol | |
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| ID | 7972709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5601101 |
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| End bp | 5602276 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795870 |
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| Product | aminoglycoside phosphotransferase |
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| Protein accession | YP_002947144 |
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| Protein GI | 239818234 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3178] Predicted phosphotransferase related to Ser/Thr protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCAC CCCCGCTCCC GGCCTCCGAG CCCACACCCT CCGCCACGGC CATTCTCTGG
GCAGATCCGC AGCGGGCCGC GGCGTTCCAG AACTGGCTGG CCGGCATCGG CGCCGCGCAC
GGCCTGCGGC CCGAGACGGT GCGCCTTGCG TCCGCCGATG CGAGCTTTCG CCGCTACTTC
CGCATCGACG CCACGGGGAG CGCCGCCAGC CGCATCGTGA TGGATGCGCC GCCCGACAAG
GAGAACAGCG AGCCCTTCGT GCAGGTCGCC CGCCTGATGG CCGAGGCCGG CGTGACCGCG
CCGCAGGTGC TCGAGTGGGA CCGGACCCAC GGCTTCCTGC TGCTCGACGA CCTGGGCCGC
GAGACCATGC TCGACGTGAT CGACCCGGCC CGGCCCGACG CCAGCCGCCC GCTCTACGAC
CAGGCGATTG ATGCGCTGAT CCGCTGGCAG CTGGCCTCCA GGCCAGGCGT GCTGCCGCCC
TACGACAGGG CGCTGCTCGA GCGCGAACTG GCGCTTTTTC CCGAGTGGTA CATCGGGCGG
CATCGCGGCA TCGCGGTGGA GGGCCAGCTC AAGGAGCGGC TGGAACGCAG CTTCAGGCTG
ATCGTCGAGA GCAACCTGGC CTCGCCGAGC GTCTACGTGC ACCGCGACTT CATGCCGCGC
AACCTGATGG TCAATGTGGC CCCCACGCTC GGCACTGGCG TGTCCTCGCT GCCCCCCGAG
GGGGCGCTCG CCGCCTTGGG GCGGCCCGGC GGCGGCTCGG CTGCCGATCT CGGCGTGCTC
GACTTCCAGG ACGCGGTCTA CGGCCCGATC ACCTACGACA TCGCCAGCCT GATGCGCGAC
GCCTTCCTGA GCTGGGACGA GGAATTCGTG CTCGACGTCA CCATTCGTTA CTGGGAAGCC
GCGCGCAAGG CCAGGCTGCC GGTCGATGCC GATTTCGGCG CGTTCTACCG CTCGGTCGAA
TGGATGGGGC TGCAGCGCCA CCTCAAGGTG GCCGGCATCT TCGCCCGCCT CACGCTGCGC
GACGGCAAGC CGCGCTATTT GGCGGACACG CCGCGCTTCA TCGCCTACAT CCGCTCCACC
GCCAGCCGCT ACATGGAGCT CACGCCGCTG CTGCGGGTGA TCGACGAGAT CGAAGGCACG
TCGGCGCTGA GCGGCTTCGC CTACGGCAGG GTCTAG
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| Protein sequence | MTAPPLPASE PTPSATAILW ADPQRAAAFQ NWLAGIGAAH GLRPETVRLA SADASFRRYF
RIDATGSAAS RIVMDAPPDK ENSEPFVQVA RLMAEAGVTA PQVLEWDRTH GFLLLDDLGR
ETMLDVIDPA RPDASRPLYD QAIDALIRWQ LASRPGVLPP YDRALLEREL ALFPEWYIGR
HRGIAVEGQL KERLERSFRL IVESNLASPS VYVHRDFMPR NLMVNVAPTL GTGVSSLPPE
GALAALGRPG GGSAADLGVL DFQDAVYGPI TYDIASLMRD AFLSWDEEFV LDVTIRYWEA
ARKARLPVDA DFGAFYRSVE WMGLQRHLKV AGIFARLTLR DGKPRYLADT PRFIAYIRST
ASRYMELTPL LRVIDEIEGT SALSGFAYGR V
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