Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5274 |
Symbol | |
ID | 7972707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5596857 |
End bp | 5598266 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644795868 |
Product | SurA domain protein |
Protein accession | YP_002947142 |
Protein GI | 239818232 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACA TCCGTTCCAT CCTGACCCTG GGCTGCCTCG CGGCACTGGC CGCGGCCTCG GGCGCGCAAG GCCTGCGTCC CGGTGGCGGC AGCGGCATCA CCGACATCAT GCGCGCCGGT CCCCGGCTGG CGCCACCGGC GCCGCGCACC GCGCCTTCCA CCGCCGCGCC GGTGCAGCGC GCGGCCGAAT ACATCGTCGC ACTGGTCAAT TCCGAACCGA TCACCAACAC CGAGGTGCAG TCGCGCGTCA CGCGCCTGAT CCGCGAAAAC GCCGAAGCCG AGCGCGTGCC GCGCGCCGAG CTCACGCGCC TGGTGCTCGA GCGCCTGATC TCCGAGCGCG CACAGCTCCA GCTGGCCAAG GAAAACGGCA TCAAGGTGGA CGAGGTCGCC ATCGACCAGG CCGAGCAGAC CGTGGCGCGG CAGAACCAGA TCAGCGTCGA GGAGCTGCGC CGCCGCGTGG TGGCCGAGGG TATTTCGCAG CGCGAATTCC GCAACGACCT GCGCGACCAG CTGCTGCTCA CGCGCCTGCG CGACCGCGAG GTCGAGTCCA AGGTCAAGAT CAGCGACGCC GAGGCCGACG AATACCTGCG CGACCAGCGC AACGCCCCCA CCAAGGACGC GGCGCTGCAG AACATCAACC TCGCGCACCT GCTGGTCGCC GTGCCCGAGA ACGCCACCGA GGCGCAGGTC GCCACCTTGC AGCAGCGGGC CCAGGGCCTC GCGCAGCGCG CCCGCGCCGG CGAAGACTTC GCCAAGCTGG TGCAGGAGAA CTCCGATTCG CCGGACCGCG CCAATGGTGG CGCCGTCGGC ATGCGCACCG CCGACCGCTA TCCGTCGCTG TTCGTCGAAG CCACGCAGTC GACGCCGGTC AACGGCATTG CCGGCCCGAT CCGCTCGGGT GCGGGCTTCC ACGTGCTCAA GGTGCTGGCC AAGGCCCAGC TCGGCGCCAC CGACGCCACC GTGACCCAGA CGCAGGTGCG CCACATCCTG CTGCTCAACG ACCCGAAGCG CACCACCGCC CAGGCCGTGG CGCAGCTCGC GGAATTCAAG CGCCGCCTGC AGGCCCGCAC GGCCGACTTC GCCGGCCTGG CGCGCGACAA CTCGCAGGAT GCGAGCGCCA AGGAGGGCGG CGACCTGGGC TGGTCGCGCC CGGGCCAGTT CGTGCCCGAG TTCGAGGAAG CCATGGACCG CCTGGCGCCG GGCCAGATCA GCGACCCGGT GGTCTCGCGC TTCGGCGTGC ACCTGATCCA GGTGGTCGGC CGGCGCGAAT CCAAGCTCAC GCAGGCCGAG CAGCGCGAAG CCGCGCGGGC CGTGCTGCGC GAGCAGCGGG TCGAGGAAGC CTTCAGCACG TGGGTGCAGG AAACGCGCGC GCGCGCCTAC GTCGAATACC GCGAGCCGCC CCAGTCCTGA
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Protein sequence | MKHIRSILTL GCLAALAAAS GAQGLRPGGG SGITDIMRAG PRLAPPAPRT APSTAAPVQR AAEYIVALVN SEPITNTEVQ SRVTRLIREN AEAERVPRAE LTRLVLERLI SERAQLQLAK ENGIKVDEVA IDQAEQTVAR QNQISVEELR RRVVAEGISQ REFRNDLRDQ LLLTRLRDRE VESKVKISDA EADEYLRDQR NAPTKDAALQ NINLAHLLVA VPENATEAQV ATLQQRAQGL AQRARAGEDF AKLVQENSDS PDRANGGAVG MRTADRYPSL FVEATQSTPV NGIAGPIRSG AGFHVLKVLA KAQLGATDAT VTQTQVRHIL LLNDPKRTTA QAVAQLAEFK RRLQARTADF AGLARDNSQD ASAKEGGDLG WSRPGQFVPE FEEAMDRLAP GQISDPVVSR FGVHLIQVVG RRESKLTQAE QREAARAVLR EQRVEEAFST WVQETRARAY VEYREPPQS
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