Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5249 |
Symbol | |
ID | 7972682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5570972 |
End bp | 5571394 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644795843 |
Product | Glyoxalase/bleomycin resistance protein/dioxygenase |
Protein accession | YP_002947117 |
Protein GI | 239818207 |
COG category | [R] General function prediction only |
COG ID | [COG3607] Predicted lactoylglutathione lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000066738 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAACA AGCAGATCTT CGTGAACCTC GCCGTCAAGA ACCTCGACAA GTCCAAGGCA TTCTTTGCCG CGCTGGGCTA CACCTTCAAC GAGAAGTTCA CGGACGCCAA CGCCGCCTGC ATGGTGATCC AGGAAGGCAG CATCCACGCG ATGCTGCTGG TGGAAGACTT CTTCAAGACC TTCACAAGCA AGAGCCTCGC CGACACCAGC AAGAGCACCG AGGTGCTGCT GTGCCTGTCG TGCGAAAGCC GCGCCGAGGT CGACGAGATG GTGGCCAAGG CGGTGGCCGC GGGCGGCACG GTGCCGCGCG AGCCGCAGGA CTACGGCTTC ATGTACGGCC ACGGCTTCCA GGACCTCGAC GGCCACCTGT GGGAGCTGAT GTACATGGAC CCGAACGCCG AAGTGACCCA CCAGAACGCC TGA
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Protein sequence | MANKQIFVNL AVKNLDKSKA FFAALGYTFN EKFTDANAAC MVIQEGSIHA MLLVEDFFKT FTSKSLADTS KSTEVLLCLS CESRAEVDEM VAKAVAAGGT VPREPQDYGF MYGHGFQDLD GHLWELMYMD PNAEVTHQNA
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