Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5218 |
Symbol | |
ID | 7969877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5539117 |
End bp | 5539365 |
Gene Length | 249 bp |
Protein Length | 82 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644795812 |
Product | hypothetical protein |
Protein accession | YP_002947086 |
Protein GI | 239818176 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0877789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGTG AGACCTTGCT GCACATCGAC GGCCAGCTCG TCCGGGTTAA AGCGGGCAGC TCGGTTGCCG CCGCCTTGCA CGTGGCCGGC GGCATGGGCG TGGCGCGAAC CTCCGTCACG GGCCAGCCGC GTGCGCCGTT CTGCGGCATG GGCGTGTGCC AGGAATGTCG CGTGCTGATC GACGGCCGCC GCCGGCTCGC CTGCCAGACG GTCTGCGGCG AAGGCATGCG CGTGGAGACC TCGGGATGA
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Protein sequence | MSGETLLHID GQLVRVKAGS SVAAALHVAG GMGVARTSVT GQPRAPFCGM GVCQECRVLI DGRRRLACQT VCGEGMRVET SG
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