Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5196 |
Symbol | |
ID | 7969855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5519184 |
End bp | 5519669 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644795790 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_002947064 |
Protein GI | 239818154 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.416383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAAT CCGCTTTTCC GACCGACTCG GACGCTTGGC GGCAGACCCA CCTGGGCCGC CTGCTGGGCC ATGCAATGCG CCGCTTCGAC GAGCGCGTGC TCGAACTCAT GGCGCATGAC GTGAACGTGC CGCTGGCGCT GTCGAACCTT GCGGCGCGCG CGCAGGTGAG CGCCGCGCAC ATCCACATCA CGCGGCACCT GGCGCGCGAG GGCTCGCGCC TGACCGAACT CGCGCAGCGC GCCGGCATGA CCAAGCAGGC GATGGGCGCG CTGGTGGACC AGTGCGAGGC CTGGGGCCTG GTCACGCGCG GGCCCGATCC GCTCGATGCG CGGGCGCGGC GCGTGCTCTT CACCACCGAC GGCCTGGCCT GGCTCGACGC CTTCCGCGGC GCGGTGACGC AGGCCGAGCG CGAGTTCCGC GCGAGCGTGG GCAACGACAT TGCCACCGTG GTAACCATCG GACTCGAGGC CTACACGGCG GGCTAG
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Protein sequence | MAESAFPTDS DAWRQTHLGR LLGHAMRRFD ERVLELMAHD VNVPLALSNL AARAQVSAAH IHITRHLARE GSRLTELAQR AGMTKQAMGA LVDQCEAWGL VTRGPDPLDA RARRVLFTTD GLAWLDAFRG AVTQAEREFR ASVGNDIATV VTIGLEAYTA G
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