Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5173 |
Symbol | |
ID | 7969832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5494438 |
End bp | 5495187 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644795767 |
Product | Integral membrane protein TerC |
Protein accession | YP_002947041 |
Protein GI | 239818131 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACAGT TCATGACCCC GGAATTCTGG GTCGCGGTCG GTCAGATCAT CATGATCGAC ATCCTGCTCG GCGGCGACAA CGCCGTCGTC ATTGCCCTGG CCTGCCGCAA GCTGCCGCCC GCGCAACGCA CCAAGGGCAT TCTCTGGGGC ACGGCCGGTG CCATTGCGCT GCGCGTGATA TTGATCTTCT TCGCGCTCAC GCTGCTGGCC ATTCCGTTCC TGAAACTGGT CGGCGCCGCA TTGCTGTTGT GGATCGGCAT CAAGCTGCTG GCGCCCGACC ATGACGATGC GCACGGCAAC ATCCAGAGCA GCGACAAGCT GTGGGGCGCG GTCAAGACCG TGATCGTGGC CGACCTGGTG ATGAGCGTGG ACAACGTGAT TGCCATTGCC GGTGCCGCGC AAGGCGCCGG CCAGGCCCAT CAGATGCCGC TGGTGATCTT CGGCCTGCTG GTGAGCATTC CGATCATCGT CTGGGGCAGT CAGCTGGTCA TCAAGCTGAT GGACCGCTTC CCGGTCATCA TCACGCTCGG CGGCATGCTG CTGGGCTGGA TCGCCGGCAC CATGGCGGTG TCCGATCCCG CGCTGTCGAA CACCGCGGCC TGGACCTGGG TGCCGAAGCT GCCGCAGACC GATACCATCC GGTACGCCGC AGGCATTGCC GGCGCGCTGC TGGTGCTGGC CGTCGGCAAG TGGGTGGCCA TGCGCCAGGC CCGCCAGAAG CCGGCCGAAG CCGCAACGTC GTCGAGCTGA
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Protein sequence | MEQFMTPEFW VAVGQIIMID ILLGGDNAVV IALACRKLPP AQRTKGILWG TAGAIALRVI LIFFALTLLA IPFLKLVGAA LLLWIGIKLL APDHDDAHGN IQSSDKLWGA VKTVIVADLV MSVDNVIAIA GAAQGAGQAH QMPLVIFGLL VSIPIIVWGS QLVIKLMDRF PVIITLGGML LGWIAGTMAV SDPALSNTAA WTWVPKLPQT DTIRYAAGIA GALLVLAVGK WVAMRQARQK PAEAATSSS
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