| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5096 |
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| Symbol | |
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| ID | 7971467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5408134 |
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| End bp | 5409039 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795690 |
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| Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
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| Protein accession | YP_002946964 |
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| Protein GI | 239818054 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
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| TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCG TCCACACCTC TTCCATCCAG AGCCTGCCCC TGCTTGCGCG CGGCAAGGTG
CGAGACAACT ACGCCGTCGG CGAAGACCGC ATCCTGATGG TCGCGAGCGA CCGGCTCAGC
GCCTTCGACG TGATCATGGG CGAGCCGATC CCGGGCAAGG GCGAGATCCT CACGCAGATG
GCGCTGTGGT GGTTCGACCG CCTCGGCCAG CTGTGCCCCA ACCACCTGAC GGGCGAAGCG
CCCGAGAGCG TGGTCACGCC CGAAGAAGTG CCGCAGGTCA CCGGCCGCTC GATGCTGGTC
AAGCGCCTGA CGCCGATCCC GGTCGAGGCC GTGGTGCGCG GCTACCTGGC CGGCAGCGGC
TGGAAGGAAT ACCAGGAAAG CCGTTCGGTC TGCGGCGTGC CGCTGCCCGA AGGGCTCACC
AACGCGAGCA AGCTGCCGCG CCCGATCTTC ACGCCCGCCG CCAAGGCCGC GGCCGGCGAG
CACGACGAGA ACATCAGCTA CGACCGCGTG GTCGAGATCG TCGGCCCCAA GCTGGCGCAG
CAGATCCGCG AGACCAGCCT GGAGATCTAC GAAACCGCCG CGCAGATCGC GCTGGGCAAG
GGAATGATCA TTGCCGACAC CAAGTTCGAG TTCGGCCTGG ACGAAGCCGG CACGCTGGTG
CTGATGGACG AAGTGCTCAC GCCCGACAGC TCGCGCTACT GGCCGGTCGA GGGCTACCAG
GCCGCGCTGG CCGCGGGCGC CAATCCGCCG AGCTACGACA AGCAGTTCGT GCGCGACTGG
CTCGAAGCCA CCAAGATCAA CGGCAAGCCC TGGGACAAGA CCCCGCCGGC GCCGCGCCTG
CCGGCCGAGG TCATCGAAAA GACCGCGGCC AAGTACCGCG AAGCGCTGGA GCGCCTCACG
GGCTGA
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| Protein sequence | MTTVHTSSIQ SLPLLARGKV RDNYAVGEDR ILMVASDRLS AFDVIMGEPI PGKGEILTQM
ALWWFDRLGQ LCPNHLTGEA PESVVTPEEV PQVTGRSMLV KRLTPIPVEA VVRGYLAGSG
WKEYQESRSV CGVPLPEGLT NASKLPRPIF TPAAKAAAGE HDENISYDRV VEIVGPKLAQ
QIRETSLEIY ETAAQIALGK GMIIADTKFE FGLDEAGTLV LMDEVLTPDS SRYWPVEGYQ
AALAAGANPP SYDKQFVRDW LEATKINGKP WDKTPPAPRL PAEVIEKTAA KYREALERLT
G
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