| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5094 |
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| Symbol | |
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| ID | 7971465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5406620 |
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| End bp | 5407540 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795688 |
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| Product | thioredoxin |
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| Protein accession | YP_002946962 |
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| Protein GI | 239818052 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3118] Thioredoxin domain-containing protein |
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| TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.443129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGACA TCACTCTCGA AAATTTTCAG GCTGAACTGA TCGAAGGCTC GGTCGCCACG
CCGGTGCTGC TCGACATCTG GGCCGAATGG TGCGGACCGT GCAAGCAGCT CGGCCCGGTG
CTCGAAAAGC TCGAAACCGA GTACGCCGGG CGCTTCACGC TGGCCAAGCT GGACGCCGAC
AAGGTGCCCC AGATCTCCTC GCAGCTGTCC GAAATGTTCG GCGTGCGCAG CATCCCGTTC
TGCGTGATGT TCAAGGACGG CCAGCCGGTG GACGGCTTCG TCGGCGCCAT TCCGGCCGAC
AAGATCCGCG AATTCCTCGA CAAGCACGTG CCCGCCGCCG AGCAGCTCGA AGCCGCCTCC
CAGGAGGCCG CGGCCCAGGA AGCGCTGGCC GAAGGCGACA CCGAGGGCGC GCTCGAGCGC
CTGCAGCATG CGGTGGCCAC CGACCCGGCC AATGACGATG CGCGCTTCGA CTACATCAAG
CTGCTGCTGC AGATGGGCCG CATCGACGAT GCCAAGGTGG CGTTCGCGCC GGTGATCGCC
AGGACCACGC TGGTGCGCCG CTTCGATTCG CTGCAGCGCT GGATGGACGC CATCGATTTT
GCGGCGCCGG CCTCGGGTGC CGCGCCCGCC ATCGCCGAGT TCGACGCGAA GATCGCCGCC
GGCAAGCGCG ACTTCGACGC CCGCTTCGGC CGCGCCCGCC TGCTGATGGC CGAGCAGCGC
TGGACCGACG CCATGGACGA GCTGCTCGAG ATCCTGATGC GCGACAAGGC CTGGAACGAG
GAGCTCGCGC GCAAGACCTA CATCGCGATC CTCGACCTGA TCGAGCCGCC CAAGGTGAAG
GTGGCGGACG GCCAGATTCC GCCGGACGAT CCGGTGGTGG CCACCTACCG CCGCCGGCTC
AGCAGCGTCG TGCTGAGCTG A
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| Protein sequence | MIDITLENFQ AELIEGSVAT PVLLDIWAEW CGPCKQLGPV LEKLETEYAG RFTLAKLDAD
KVPQISSQLS EMFGVRSIPF CVMFKDGQPV DGFVGAIPAD KIREFLDKHV PAAEQLEAAS
QEAAAQEALA EGDTEGALER LQHAVATDPA NDDARFDYIK LLLQMGRIDD AKVAFAPVIA
RTTLVRRFDS LQRWMDAIDF AAPASGAAPA IAEFDAKIAA GKRDFDARFG RARLLMAEQR
WTDAMDELLE ILMRDKAWNE ELARKTYIAI LDLIEPPKVK VADGQIPPDD PVVATYRRRL
SSVVLS
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