| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5082 |
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| Symbol | pyrF |
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| ID | 7974201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5395197 |
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| End bp | 5396021 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795676 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_002946950 |
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| Protein GI | 239818040 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTCC TCGACAAGCT GGCCACCGCA CAGCAAACAA ACGGTTCGTT GCTCTGCGTG
GGGCTCGATC CGGAGCCAGC CAAGTTCCCG GGGCAGCTCA AGGGCGACGC CAGCCGCATC
TATGACTTCT GCGCGCGCAT CGTCGACGCG ACGGCCGGCC TGGTCATCGC CTTCAAGCCG
CAGATCGCCT ATTTCGCGGC CCACCGCGCC GAAGCCCAGC TCGAACAACT GATGGAGCAC
ATGCGCCGCA ACGCGCCCGG CGTGCCCGTG ATCCTGGACG CCAAGCGCGG CGACATTGGC
TCCACGGCCG AGCAGTACGC CATCGAGGCC TTCGAGCGCT ACGGCGCCGA CGCCGTGACC
CTGTCGCCCT TCATGGGCTT CGACTCGGTG GCGCCCTACC TCAAGCACCA GGGCAAGGGC
GCCTTCCTGC TCTGCCGCAC CAGCAACCCC GGCGGCTCCG ACCTGCAGGG CCAGCGGCTG
GCGGGCATCG AGGGCCAGCC CTTCCTCTAC GAACACGTCG CCCGGCTGGC GCAGGGCCCA
TGGAACCTCA ACGGCCAGCT CGGCCTCGTG GTGGGCGCGA CCTACCCGGC CGAGATCGAG
CGCGTGCGCG AACTCGCACC GACGGTGCCG CTGCTGATCC CCGGCGTCGG TGCCCAGGGC
GGCGATGCGG TGGCCACGGT GCGCGCCGGC TGGCGCCCCG ATGCGCCGAT CATCGTGAAC
TCGTCGCGCG CCATCATCTA CGCCTCCTCG GGCGACGACT TTGCCGAGGC GGCCCAAAAG
GCCGCACGCT CTACGCGCGA CGCGCTGGAA GCCGCGAAGC CCTGA
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| Protein sequence | MTFLDKLATA QQTNGSLLCV GLDPEPAKFP GQLKGDASRI YDFCARIVDA TAGLVIAFKP
QIAYFAAHRA EAQLEQLMEH MRRNAPGVPV ILDAKRGDIG STAEQYAIEA FERYGADAVT
LSPFMGFDSV APYLKHQGKG AFLLCRTSNP GGSDLQGQRL AGIEGQPFLY EHVARLAQGP
WNLNGQLGLV VGATYPAEIE RVRELAPTVP LLIPGVGAQG GDAVATVRAG WRPDAPIIVN
SSRAIIYASS GDDFAEAAQK AARSTRDALE AAKP
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