| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5052 |
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| Symbol | rpmD |
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| ID | 7974171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5371044 |
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| End bp | 5371229 |
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| Gene Length | 186 bp |
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| Protein Length | 61 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644795646 |
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| Product | 50S ribosomal protein L30 |
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| Protein accession | YP_002946920 |
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| Protein GI | 239818010 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1841] Ribosomal protein L30/L7E |
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| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0761193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGACGC AACAACAAAC CCTCAAGGTG CAATTGGTCA AGAGCCCGAT TGGCACCAAG
GAATCGCATC GCGCGACCGT GCGTGGCCTC GGCCTGCGCA AGCTCAACAG CGTGAGCGAG
CTGCAGGACA CCCCGGCGGT GCGCGGCATG ATCAACAAGA TCAGTTATCT GGTCAAAGTT
CTGTAA
|
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| Protein sequence | MTTQQQTLKV QLVKSPIGTK ESHRATVRGL GLRKLNSVSE LQDTPAVRGM INKISYLVKV
L
|
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| |