| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5051 |
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| Symbol | rplO |
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| ID | 7974170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5370601 |
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| End bp | 5371032 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795645 |
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| Product | 50S ribosomal protein L15 |
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| Protein accession | YP_002946919 |
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| Protein GI | 239818009 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0200] Ribosomal protein L15 |
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| TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0977317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACTCA ATGGCATCAA GCCGGCAGCT GGCGCCAAGC ACGCCAAGCG CCGCGTCGGC
CGCGGTATCG GCTCCGGTAT CGGCAAGACC GCAGGCCGTG GTCACAAGGG TCAGAAGTCG
CGCGCAGGCG GCTTCCACAA GGTCGGCTTC GAAGGCGGTC AAATGCCGCT GCAGCGCCGC
CTGCCCAAGC GCGGCTTCAA GTCGCACCTG CTGAAGTTCA ACGCCGAAGT CACGCTGACT
GCCCTCGAGC AGCTCGGCCT GGCCGAAGTG GACATCCTGG CGCTCAAGCA AGCCGGCCTC
GTGGGCCAGC TCGCCAAGGT CGTCAAGATC GTCAAGACCG GTGAACTCAC CAAGGCCGTC
AAGCTGACGG GCGTGGGTGC AACCGCTGGT GCCAAGGCTG CGATCGAAGC AGCCGGCGGC
AGCGTCGCCT GA
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| Protein sequence | MELNGIKPAA GAKHAKRRVG RGIGSGIGKT AGRGHKGQKS RAGGFHKVGF EGGQMPLQRR
LPKRGFKSHL LKFNAEVTLT ALEQLGLAEV DILALKQAGL VGQLAKVVKI VKTGELTKAV
KLTGVGATAG AKAAIEAAGG SVA
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