| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5009 |
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| Symbol | |
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| ID | 7974127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5322207 |
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| End bp | 5323271 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795603 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002946878 |
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| Protein GI | 239817968 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTACA GAGAGAACGG CCAGTTCAAG TCGAGCTACC GCGCCGACCA GCAGATCTTC
CCGATCGCGC AGGACCGCAT CGCGATGTTG GTGCTGCTGC TCGCGGCCTT CGTCGCGGTG
CCGCTGGGCG TGTCGGACTA CTGGATGCGC GCCATCCTCA CGCCCTTTCT GATCCTGTCG
CTCGCGGCGC TGGGCCTCAA CATCCTGGTC GGCTATTGCG GGCAGATCTC GCTCGGCACC
GGCGCCTTCA TGGCGGTGGG CGCGTACGCG GCCTACAACT TCCAGGTGCG CATCGACGGC
ATGCCGCTCA TTGCCTCGCT GCTGCTGGGC GGCCTGTGCG CCACGGTGAT CGGCGTGCTG
TTCGGCATTC CGAGCCTGCG CATCAAGGGG CTCTACCTGG CGGTGGCCAC GCTGGCGGCG
CAGTTCTTTA CCGACTGGGC GTTCCTGCGC ATCCAGTGGT TCACCAACAA TTCTTCTTCT
GGCTCGGTGA GCGTGGCGGG GCTCAATGTG TTCGGCGTGC CGATCGAATC GCCGGTGCAG
AAGTATCTGT TCTGCCTCGT CTTCGTGGTG GTGTTCGCGC TGCTCGCGAA GAACCTGGTG
CGCAGCGCCA TCGGCCGCGA ATGGATGGCG ATGCGCGACA TGGACGTGGC GGCCGCGGTG
ATCGGCATCC GCCCGGTGTA CGCCAAGCTC ACGGCCTTTG CAGTGAGCAG CTTCATCGTG
GGCGTGGCGG GCGCGCTGTG GGGCTTCATC CACCTGGGCG CGTGGGAGCC GGCGGCGTTC
AGCATCGACC GCTCGTTCCA GCTGCTGTTC ATGGTGATCA TCGGCGGGCT CGGCTCGATC
ATGGGCAGCT TCTTCGGTGC CGCGTTCATC GTGCTGCTGC CGCTCTTCTT GAACCAGCTG
CCGGGGTGGC TGGGCTTCTC GATCTCCACC GCGCTGGCCT CGCACCTGGA GACCATGATC
TTCGGCGCAT TGATCGTGTT CTTCCTGATC GTCGAGCCGC ACGGGCTGGC GCGGCTGTGG
TCCACCGCCA AGGAAAAGTT GCGGCTCTGG CCCTTCCCCC ACTGA
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| Protein sequence | MFYRENGQFK SSYRADQQIF PIAQDRIAML VLLLAAFVAV PLGVSDYWMR AILTPFLILS
LAALGLNILV GYCGQISLGT GAFMAVGAYA AYNFQVRIDG MPLIASLLLG GLCATVIGVL
FGIPSLRIKG LYLAVATLAA QFFTDWAFLR IQWFTNNSSS GSVSVAGLNV FGVPIESPVQ
KYLFCLVFVV VFALLAKNLV RSAIGREWMA MRDMDVAAAV IGIRPVYAKL TAFAVSSFIV
GVAGALWGFI HLGAWEPAAF SIDRSFQLLF MVIIGGLGSI MGSFFGAAFI VLLPLFLNQL
PGWLGFSIST ALASHLETMI FGALIVFFLI VEPHGLARLW STAKEKLRLW PFPH
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