| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5000 |
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| Symbol | |
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| ID | 7974282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5313894 |
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| End bp | 5314871 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795594 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946869 |
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| Protein GI | 239817959 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.420695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGCA GACACTTCGG CACGCTGGCC ATCGCGCTGG CACTTCCCCT GGCCTTCACC
GCCCCTGCGC AGGCACAGTC CTACCCCGCC AAGCCCATTC GCATGGTCGT GCCCTTCCCG
CCCGGCGGCG GCACCGACAT CCTGGCGCGG CTGGTCGCGC AGAAGCTCAC CGAGGCCAAC
CACTGGACCG TGGTGCCCGA CAACCGCGGC GGCGCCGGCG GCACCATCGG CATTGCAGAG
GCCGCGCGCG CCGCGCCCAC GGGCTACGAC ATCGTGATGG GCCAGAAGGA CAACATGGTC
GTCGCGCCCT GGCTCTACAA GAACCTGAGC TACAACCCGG TGAAGGACCT CACGGCCGTG
GCGCACGTGG CCTACACGCC GGTGGTGATC GTCACGCAGG CCAACTCGAA GTTCAAGACG
CTCGACGACG TGGTGAAAGC CGCGCGCGCG GCGCCCGACA CCGTCACCTA CGGCTCGCCC
GGCAACGGCA CCACCATCCA CCTGGCCGGC GAGATCTTCA ACAGCGCCGC CCAGATCAAG
ATGCGCCACG TGCCCTACAA GGGCTCCAAC GCGGCCATGA TGGACGTGCT CGCGGGCAAC
GTCGACCTGA TGGTGTCGTC GGTGCCCTCG GCGCTGGCGC AGATCAAGGC GGGCAAGCTG
CGCCCGCTGG CCGTGACCTC GGCCAAGCGC AGCACCTCGC TGCCCGAGAC GCCCACCGTG
GCCGAGCTCG GCTACAAGGG CTTCGACGTG TCCACCTGGT ACGGCCTCTT CGTGCCCGCC
AAGACGCCGA AGGACGTGAT CGCCACGCTG AATACCGAAG TCAACAAGCT GCTGGCCACG
CCCGAAATGA AGGCCGCCAT CATCGCGCAG GGCGCCGAGC CGCAGAGCAT GACGCCCGAA
CAGTTCCAGT CGCTGCTGAA GACCGACTAC GAGAAGTGGA AGGGCATCGT GCAAGCCTCG
GGCGCGACCA TCGAATAA
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| Protein sequence | MIRRHFGTLA IALALPLAFT APAQAQSYPA KPIRMVVPFP PGGGTDILAR LVAQKLTEAN
HWTVVPDNRG GAGGTIGIAE AARAAPTGYD IVMGQKDNMV VAPWLYKNLS YNPVKDLTAV
AHVAYTPVVI VTQANSKFKT LDDVVKAARA APDTVTYGSP GNGTTIHLAG EIFNSAAQIK
MRHVPYKGSN AAMMDVLAGN VDLMVSSVPS ALAQIKAGKL RPLAVTSAKR STSLPETPTV
AELGYKGFDV STWYGLFVPA KTPKDVIATL NTEVNKLLAT PEMKAAIIAQ GAEPQSMTPE
QFQSLLKTDY EKWKGIVQAS GATIE
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