| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4972 |
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| Symbol | |
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| ID | 7974254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5283714 |
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| End bp | 5284700 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795567 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946842 |
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| Protein GI | 239817932 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.345918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGACACC TCACTCCCTT CTTCGCGGCC CTGGCCGCCT GCGCCGCGCT GCTGGGCGCC
GCTCCCGCCG CACAGGCCCA GGGGCCCTTT CCTTCCAAGC CCCTGATGCT GGTCGTGCCC
TTCCCGCCCG GCGGCCCGAC CGATGCGATG GCCCGCACGC TGGCCGCCGA GATGAAGGAC
CGCCTCGGCC AGCCGATGAT CGTGGAGAAC CGCGCAGGCG CGGGCGGCAA CATCGGCGCC
GACTACGTGG CGCGCGCCGA GGCCGACGGC CACACGCTGC TGTTCGGGAC CTCGGGCCCG
CTCGCCATCA ACGCGAGCCT CTACCGCAAG ATCAGCTACG ACCCGGTCAA GAGCTTTGCG
CCGGTGATCC AGGTCGGCTA CCTGCCGAAC ATCCTGGTGG TGAACCCCGC GCTGCCGGTG
AAGGACGTGA AGGAGCTGGT CGCCTACGCC AAGGCCAACC CCGGCAAGCT CAGCTACGCA
TCGTCGGGCA ATGGCGCGTC GTCGCACCTG GCGGGCGTGC TGTTCAACTC GGTGGCCGGC
ACCGACCTGC AGCACATTCC CTACAAGGGC ACCGGCCCCG CGCTCAACGA CCTGCTCGGC
AACCAGGTGA GCATGACCTT CACCGACATC CTCACCGCGC TGCCCTACGT GAGGGCCGGC
AAGCTGCGCG CGCTGGGCGT GGCGACGCTC GCGCGCTCGC AGGCGCTGCC CGAGGTGCCG
ACGATTGCCG AGCAGGGCTA CAAGGGCTAC GACGTGAGCG TGTTCTTCGG CATCGTGGCG
CCCACCGGCA CGCCCGCGGA CCGCGTAGCC AGGCTCAACC AGGCCTTCGC CGAAGTGCTG
AACTCGCCCA AGGTCAAGCA GATGTTCGCG GCGCAGGGCC TCGAGGCATC GGCGGACACG
TCGCCACAGA AGCTCGGGCA GTTCATCGTG AGCGAGTCGG CCAAGTGGAA GGATGTCGTG
AAGAAGTCTG GGGCGCAGCT GGATTGA
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| Protein sequence | MRHLTPFFAA LAACAALLGA APAAQAQGPF PSKPLMLVVP FPPGGPTDAM ARTLAAEMKD
RLGQPMIVEN RAGAGGNIGA DYVARAEADG HTLLFGTSGP LAINASLYRK ISYDPVKSFA
PVIQVGYLPN ILVVNPALPV KDVKELVAYA KANPGKLSYA SSGNGASSHL AGVLFNSVAG
TDLQHIPYKG TGPALNDLLG NQVSMTFTDI LTALPYVRAG KLRALGVATL ARSQALPEVP
TIAEQGYKGY DVSVFFGIVA PTGTPADRVA RLNQAFAEVL NSPKVKQMFA AQGLEASADT
SPQKLGQFIV SESAKWKDVV KKSGAQLD
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