Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4972 |
Symbol | |
ID | 7974254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5283714 |
End bp | 5284700 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644795567 |
Product | hypothetical protein |
Protein accession | YP_002946842 |
Protein GI | 239817932 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.345918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGACACC TCACTCCCTT CTTCGCGGCC CTGGCCGCCT GCGCCGCGCT GCTGGGCGCC GCTCCCGCCG CACAGGCCCA GGGGCCCTTT CCTTCCAAGC CCCTGATGCT GGTCGTGCCC TTCCCGCCCG GCGGCCCGAC CGATGCGATG GCCCGCACGC TGGCCGCCGA GATGAAGGAC CGCCTCGGCC AGCCGATGAT CGTGGAGAAC CGCGCAGGCG CGGGCGGCAA CATCGGCGCC GACTACGTGG CGCGCGCCGA GGCCGACGGC CACACGCTGC TGTTCGGGAC CTCGGGCCCG CTCGCCATCA ACGCGAGCCT CTACCGCAAG ATCAGCTACG ACCCGGTCAA GAGCTTTGCG CCGGTGATCC AGGTCGGCTA CCTGCCGAAC ATCCTGGTGG TGAACCCCGC GCTGCCGGTG AAGGACGTGA AGGAGCTGGT CGCCTACGCC AAGGCCAACC CCGGCAAGCT CAGCTACGCA TCGTCGGGCA ATGGCGCGTC GTCGCACCTG GCGGGCGTGC TGTTCAACTC GGTGGCCGGC ACCGACCTGC AGCACATTCC CTACAAGGGC ACCGGCCCCG CGCTCAACGA CCTGCTCGGC AACCAGGTGA GCATGACCTT CACCGACATC CTCACCGCGC TGCCCTACGT GAGGGCCGGC AAGCTGCGCG CGCTGGGCGT GGCGACGCTC GCGCGCTCGC AGGCGCTGCC CGAGGTGCCG ACGATTGCCG AGCAGGGCTA CAAGGGCTAC GACGTGAGCG TGTTCTTCGG CATCGTGGCG CCCACCGGCA CGCCCGCGGA CCGCGTAGCC AGGCTCAACC AGGCCTTCGC CGAAGTGCTG AACTCGCCCA AGGTCAAGCA GATGTTCGCG GCGCAGGGCC TCGAGGCATC GGCGGACACG TCGCCACAGA AGCTCGGGCA GTTCATCGTG AGCGAGTCGG CCAAGTGGAA GGATGTCGTG AAGAAGTCTG GGGCGCAGCT GGATTGA
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Protein sequence | MRHLTPFFAA LAACAALLGA APAAQAQGPF PSKPLMLVVP FPPGGPTDAM ARTLAAEMKD RLGQPMIVEN RAGAGGNIGA DYVARAEADG HTLLFGTSGP LAINASLYRK ISYDPVKSFA PVIQVGYLPN ILVVNPALPV KDVKELVAYA KANPGKLSYA SSGNGASSHL AGVLFNSVAG TDLQHIPYKG TGPALNDLLG NQVSMTFTDI LTALPYVRAG KLRALGVATL ARSQALPEVP TIAEQGYKGY DVSVFFGIVA PTGTPADRVA RLNQAFAEVL NSPKVKQMFA AQGLEASADT SPQKLGQFIV SESAKWKDVV KKSGAQLD
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