| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4942 |
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| Symbol | |
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| ID | 7974224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5250172 |
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| End bp | 5251116 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644795537 |
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| Product | Alpha/beta hydrolase fold-3 domain protein |
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| Protein accession | YP_002946812 |
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| Protein GI | 239817902 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0657] Esterase/lipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCATC CCCAGGCGCG CGCCTTGCTC GACTTCATCG AGGCGCGCGG CATCCCGCCG
ACCCACACGC TTTCGCCGGC CGAGGCGCGC GCCTTCTATC GCGAGCGCCG CGCCACCACG
CAGCCCGAAG CCCCGCCGGT CGCCGAAGTC CGCGAGCTGA ACGCCGACGG GCCGCACGGC
ACCATCCCGG TGCGCCTGTA CCGCCCGCTG GGCTCCACGC CCGGTGCCGC GCTGCCGGTG
CTCGTGTACT TTCACGGCGG CGGCTGGGTC ATCGGCGACC TCGACACGCA CGACGTGCTG
TCCCGCTCGC TCGCCAACGG CGCGGGCTGC GCGGTCGTGT CGGTCGACTA CCGCATGGGG
CCCGAGCACC GCTTCCCGGC CGCGGTCGAC GACGTGCTGG CCGCCACCCG CTGGGTGCGC
CGCGAAGCCA CCTCGCTCGG CCTCGATGCC GGCCGCCTCG CGGTGGGCGG CGACAGCGCG
GGCGGCAACC TCGCAGCGGT GGCGGCCATT GGCGCGCGCG ATGCCGGCGA CCAGCCGATC
GCCTTCCAGC TGCTGATCTA TCCCGCCACC GACATGCGCC GCGGCCATCC CTCGCACCAG
GCCAACGGCC AGGGCTACCT CCTGACCCGC GACACGATGG CCTATTTCCA CGACCACTAC
ATCGACGACG CCCGGCACGA CCTCGACTGG CGCGCGTCGC CGCTGCTGCA TGCCGATCTC
TCGGGCCTGC CGCCCGCGCT GGTGCTCACG GCCGGCTACG ACCCGCTGCG CGACGAAGGC
ATGGCCTACG CCGAGGCATT GACCGCCGCC GGCAACCGCG CCGCGTACGT CTGCTTCGAG
CGCCAGATCC ACGGCTTCAT CACCATGGGC AAGGTGCTCG ACGAGGCCGA CACGGCCATC
GCGCTGTGCT GCGCCGAGCT GCGCCGCGCG CTCGCGCCGG CCTAG
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| Protein sequence | MLHPQARALL DFIEARGIPP THTLSPAEAR AFYRERRATT QPEAPPVAEV RELNADGPHG
TIPVRLYRPL GSTPGAALPV LVYFHGGGWV IGDLDTHDVL SRSLANGAGC AVVSVDYRMG
PEHRFPAAVD DVLAATRWVR REATSLGLDA GRLAVGGDSA GGNLAAVAAI GARDAGDQPI
AFQLLIYPAT DMRRGHPSHQ ANGQGYLLTR DTMAYFHDHY IDDARHDLDW RASPLLHADL
SGLPPALVLT AGYDPLRDEG MAYAEALTAA GNRAAYVCFE RQIHGFITMG KVLDEADTAI
ALCCAELRRA LAPA
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