| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4933 |
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| Symbol | |
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| ID | 7974215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5240706 |
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| End bp | 5241359 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795528 |
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| Product | multiple antibiotic resistance (MarC)-related protein |
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| Protein accession | YP_002946803 |
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| Protein GI | 239817893 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2095] Multiple antibiotic transporter |
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| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.19467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCT CGATGGACCT GATCAAGCCG CTGGTCACGC TGGTGGCCAT CGTCAACCCG
CTGGCCATCG TGCCCTTCTT CATCCACTAC ACGCAGGGAT ATTCCGATGC GCAGCGCCGG
CACACGGTGC GCATGTCGGC CTTCAGTGCC TTCGTGGTGA TTGCGGTCAG CGCGCTGATC
GGACTGCAGC TGCTGGCGTT CTTCGGCATC TCGATTGCCA GCTTCCAGGT GGGCGGCGGC
CTGCTGCTGC TCATGAGCTC GCTGTCGATG CTCAACGCCA AGCCGGCCGA GAGCAAGACC
AACGTCGAGG AGCTGCGCGC CACCGAGGTG AAAGCCTCGA TGGGCGCATC GATCGCGGTG
GTGCCGCTGA CCATTCCGCT GCTCACCGGG CCGGCCACCA TATCGACCGT GGTGATCTAT
GCCGACAAGA CGCAGCACCT GTGGGAGCTC GGGCTCCTGG TGGGCTATGG CGTGGTGGTG
GCGCTGGCCA CCGCGCTGGC GTTTTCGCTC GCGCAGCCGA TTGCGCGCGT GCTTGGCAAG
ACGGGCATCA ACATCATGAC GCGGCTCATG GGCCTTATCC TCGCGGCGCT CGCGGTCGAG
GTCATGGCCG ACGGCCTGGG CAAGCTGTTT CCGATCCTGC AGCGCGTGGG CTGA
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| Protein sequence | MSTSMDLIKP LVTLVAIVNP LAIVPFFIHY TQGYSDAQRR HTVRMSAFSA FVVIAVSALI
GLQLLAFFGI SIASFQVGGG LLLLMSSLSM LNAKPAESKT NVEELRATEV KASMGASIAV
VPLTIPLLTG PATISTVVIY ADKTQHLWEL GLLVGYGVVV ALATALAFSL AQPIARVLGK
TGINIMTRLM GLILAALAVE VMADGLGKLF PILQRVG
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